About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s016.g0074.t1
Lsat_s016.g0075.t1
Lsat_s016.g0076.t1
Lsat_s016.g0077.t1
Lsat_s016.g0078.t1
Lsat_s016.g0079.t1
Lsat_s016.g0080.t1MEMBRANE-ASSOCIATED GUANYLATE KINASE MAGUK
Lsat_s016.g0081.t1
Lsat_s016.g0082.t1
Lsat_s016.g0083.t1FATTY ACID BINDING PROTEIN
Lsat_s016.g0084.t1FATTY ACID BINDING PROTEIN
Lsat_s016.g0085.t1FATTY ACID BINDING PROTEIN
Lsat_s016.g0086.t1RIBOSOMAL PROTEIN S6 KINASE
Lsat_s016.g0087.t1WD40 REPEAT PROTEIN
Lsat_s016.g0088.t1LEUCINE ZIPPER PROTEIN 4-RELATED
Lsat_s016.g0089.t1
Lsat_s016.g0090.t1IQ DOMAIN-CONTAINING PROTEIN C
Lsat_s016.g0091.t1OS10G0105400 PROTEIN
Lsat_s016.g0092.t1STANNIOCALCIN
Lsat_s016.g0093.t1OS10G0105400 PROTEIN
Lsat_s016.g0094.t1OS10G0105400 PROTEIN
Lsat_s016.g0095.t1
Lsat_s016.g0096.t1
Lsat_s016.g0097.t1
Lsat_s016.g0098.t1TRANSMEMBRANE AND COILED-COIL DOMAIN-CONTAINING PROTEIN 6 TMCO6
Lsat_s016.g0099.t1FRUCTOSAMINE 3 KINASE-RELATED PROTEIN
Lsat_s016.g0100.t1BLEOMYCIN HYDROLASE
Lsat_s016.g0101.t1
Lsat_s016.g0102.t1SOLUTE CARRIER FAMILY 22 MEMBER
Lsat_s016.g0103.t1SOLUTE CARRIER FAMILY 22 MEMBER
Lsat_s016.g0104.t1NADH DEHYDROGENASE UBIQUINONE IRON-SULFUR PROTEIN 8, MITOCHONDRIAL
Lsat_s016.g0105.t1DCTP PYROPHOSPHATASE 1
Lsat_s016.g0106.t1IQ DOMAIN-CONTAINING PROTEIN D
Lsat_s016.g0107.t1TWO PORE CALCIUM CHANNEL PROTEIN 1
Lsat_s016.g0108.t1
Lsat_s016.g0109.t1SELENOPROTEIN O
Lsat_s016.g0110.t1
Lsat_s016.g0111.t1
Lsat_s016.g0112.t1
Lsat_s016.g0113.t1
Lsat_s016.g0114.t1
Lsat_s016.g0115.t1PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Lsat_s016.g0116.t1BACTERIOHEMERYTHRIN
Lsat_s016.g0117.t1
Lsat_s016.g0118.t15-HYDROXYTRYPTAMINE RECEPTOR
Lsat_s016.g0119.t1
Lsat_s016.g0120.t1HOMEOBOX PROTEIN BARH-LIKE
Lsat_s016.g0121.t1
Lsat_s016.g0122.t1
Lsat_s016.g0123.t1
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