About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s016.g0224.t1
Lsat_s016.g0225.t1
Lsat_s016.g0226.t1
Lsat_s016.g0227.t1
Lsat_s016.g0228.t1SOLUTE CARRIER FAMILY 22 MEMBER
Lsat_s016.g0229.t1MAP/MICROTUBULE AFFINITY-REGULATING KINASE
Lsat_s016.g0230.t1
Lsat_s016.g0231.t1NUDIX HYDROLASE
Lsat_s016.g0232.t1ANKYRIN REPEAT AND DEATH DOMAIN-CONTAINING PROTEIN
Lsat_s016.g0233.t1MICROSOMAL GLUTATHIONE S-TRANSFERASE
Lsat_s016.g0234.t1N-TERMINAL ACETYLTRANSFERASE-RELATED
Lsat_s016.g0235.t1POLYCYSTIN FAMILY MEMBER
Lsat_s016.g0236.t1
Lsat_s016.g0237.t1PERIAXIN-LIKE
Lsat_s016.g0238.t1
Lsat_s016.g0239.t1
Lsat_s016.g0240.t1SOLUTE CARRIER FAMILY 13 MEMBER
Lsat_s016.g0241.t1
Lsat_s016.g0242.t1
Lsat_s016.g0243.t1MITOCHONDRIAL PEPTIDE METHIONINE SULFOXIDE REDUCTASE
Lsat_s016.g0244.t1MITOCHONDRIAL PEPTIDE METHIONINE SULFOXIDE REDUCTASE
Lsat_s016.g0245.t1MYB-BINDING PROTEIN 1A FAMILY MEMBER
Lsat_s016.g0246.t1EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H
Lsat_s016.g0247.t1DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER
Lsat_s016.g0248.t1
Lsat_s016.g0249.t1
Lsat_s016.g0250.t1
Lsat_s016.g0251.t1
Lsat_s016.g0252.t1
Lsat_s016.g0253.t1AG-1 BLOOD STAGE MEMBRANE PROTEIN HOMOLOGUE
Lsat_s016.g0254.t1
Lsat_s016.g0255.t1
Lsat_s016.g0256.t1T-BOX PROTEIN-RELATED
Lsat_s016.g0257.t1
Lsat_s016.g0258.t1
Lsat_s016.g0259.t1
Lsat_s016.g0260.t1
Lsat_s016.g0261.t1
Lsat_s016.g0262.t1
Lsat_s016.g0263.t1MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM10
Lsat_s016.g0264.t1TRAF-TYPE ZINC FINGER PROTEIN-RELATED
Lsat_s016.g0265.t1
Lsat_s016.g0266.t1CALCIUM-TRANSPORTING ATPASE
Lsat_s016.g0267.t1
Lsat_s016.g0268.t1NEUROTRANSMITTER GATED ION CHANNEL
Lsat_s016.g0269.t1
Lsat_s016.g0270.t1
Lsat_s016.g0271.t1
Lsat_s016.g0272.t1
Lsat_s016.g0273.t1
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