About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s016.g0324.t1
Lsat_s016.g0325.t1
Lsat_s016.g0326.t1SOLUTE CARRIER FAMILY 13 MEMBER
Lsat_s016.g0327.t1
Lsat_s016.g0328.t1SOLUTE CARRIER FAMILY 13 MEMBER
Lsat_s016.g0329.t1SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED
Lsat_s016.g0330.t1MAP/MICROTUBULE AFFINITY-REGULATING KINASE
Lsat_s016.g0331.t1SMG-7 SUPPRESSOR WITH MORPHOLOGICAL EFFECT ON GENITALIA PROTEIN 7
Lsat_s016.g0332.t1ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 2
Lsat_s016.g0333.t1
Lsat_s016.g0334.t1-
Lsat_s016.g0335.t1COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
Lsat_s016.g0336.t1COLLAGEN ALPHA
Lsat_s016.g0337.t1
Lsat_s016.g0338.t1
Lsat_s016.g0339.t1-
Lsat_s016.g0340.t1
Lsat_s016.g0341.t1SPORE COAT PROTEIN SP85
Lsat_s016.g0342.t1TRANSPOSON
Lsat_s016.g0343.t1COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
Lsat_s016.g0344.t1TRANSCRIPTION ELONGATION FACTOR SPT6
Lsat_s016.g0345.t1UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
Lsat_s016.g0346.t1DJ-1 PROTEIN
Lsat_s016.g0347.t1
Lsat_s016.g0348.t1
Lsat_s016.g0349.t1
Lsat_s016.g0350.t1
Lsat_s016.g0351.t1
Lsat_s016.g0352.t1
Lsat_s016.g0353.t1SNF5
Lsat_s016.g0354.t1
Lsat_s016.g0355.t1
Lsat_s016.g0356.t1
Lsat_s016.g0357.t1
Lsat_s016.g0358.t1
Lsat_s016.g0359.t1
Lsat_s016.g0360.t1
Lsat_s016.g0361.t1
Lsat_s016.g0362.t1FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED
Lsat_s016.g0363.t1REPLICATION FACTOR A 1, RFA1
Lsat_s016.g0364.t1MERLIN/MOESIN/EZRIN/RADIXIN
Lsat_s016.g0365.t1METALLOPHOSPHOESTERASE
Lsat_s016.g0366.t1UBIQUITIN-CONJUGATING ENZYME E2
Lsat_s016.g0367.t1HFM1, ATP DEPENDENT DNA HELICASE HOMOLOG
Lsat_s016.g0368.t1NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL-RELATED
Lsat_s016.g0369.t1PAXILLIN-RELATED
Lsat_s016.g0370.t1
Lsat_s016.g0371.t1CALPAIN
Lsat_s016.g0372.t1DENSITY-REGULATED PROTEIN HOMOLOG
Lsat_s016.g0373.t1TECTONIC FAMILY MEMBER
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