Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
Title | Journal | Pubmed ID |
---|---|---|
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
Gene ID | Description |
---|---|
Lsat_s016.g0274.t1 | |
Lsat_s016.g0275.t1 | |
Lsat_s016.g0276.t1 | |
Lsat_s016.g0277.t1 | |
Lsat_s016.g0278.t1 | |
Lsat_s016.g0279.t1 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
Lsat_s016.g0280.t1 | |
Lsat_s016.g0281.t1 | MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 |
Lsat_s016.g0282.t1 | MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 |
Lsat_s016.g0283.t1 | |
Lsat_s016.g0284.t1 | NUCLEAR MITOTIC APPARATUS PROTEIN 1-RELATED |
Lsat_s016.g0285.t1 | |
Lsat_s016.g0286.t1 | MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 |
Lsat_s016.g0287.t1 | |
Lsat_s016.g0288.t1 | MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 |
Lsat_s016.g0289.t1 | CUBILIN-LIKE PROTEIN |
Lsat_s016.g0290.t1 | DNA-REPAIR PROTEIN XRCC1 |
Lsat_s016.g0291.t1 | FLOTILLIN-RELATED |
Lsat_s016.g0292.t1 | SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED |
Lsat_s016.g0293.t1 | MALARIA ANTIGEN-RELATED |
Lsat_s016.g0294.t1 | G PROTEIN-COUPLED RECEPTOR KINASE/RIBOSOMAL PROTEIN S6 KINASE |
Lsat_s016.g0295.t1 | G PROTEIN-COUPLED RECEPTOR KINASE/RIBOSOMAL PROTEIN S6 KINASE |
Lsat_s016.g0296.t1 | |
Lsat_s016.g0297.t1 | |
Lsat_s016.g0298.t1 | T7-LIKE MITOCHONDRIAL DNA HELICASE |
Lsat_s016.g0299.t1 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Lsat_s016.g0300.t1 | - |
Lsat_s016.g0301.t1 | |
Lsat_s016.g0302.t1 | |
Lsat_s016.g0303.t1 | SUGAR KINASE |
Lsat_s016.g0304.t1 | PROTEIN HGH1 HOMOLOG |
Lsat_s016.g0305.t1 | MICRORNA PROCESSOR COMPLEX SUBUNIT DGCR8 |
Lsat_s016.g0306.t1 | SER/THR-RICH PROTEIN T10 IN DGCR REGION |
Lsat_s016.g0307.t1 | GLUTATHIONE REDUCTASE |
Lsat_s016.g0308.t1 | OXYSTEROL-BINDING PROTEIN-RELATED |
Lsat_s016.g0309.t1 | |
Lsat_s016.g0310.t1 | |
Lsat_s016.g0311.t1 | |
Lsat_s016.g0312.t1 | |
Lsat_s016.g0313.t1 | |
Lsat_s016.g0314.t1 | YALI0E18722P |
Lsat_s016.g0315.t1 | |
Lsat_s016.g0316.t1 | F-BOX ONLY PROTEIN 15 |
Lsat_s016.g0317.t1 | |
Lsat_s016.g0318.t1 | SOLUTE CARRIER FAMILY 13 MEMBER |
Lsat_s016.g0319.t1 | SOLUTE CARRIER FAMILY 13 MEMBER |
Lsat_s016.g0320.t1 | SOLUTE CARRIER FAMILY 13 MEMBER |
Lsat_s016.g0321.t1 | SOLUTE CARRIER FAMILY 13 MEMBER |
Lsat_s016.g0322.t1 | SOLUTE CARRIER FAMILY 13 MEMBER |
Lsat_s016.g0323.t1 | SOLUTE CARRIER FAMILY 13 MEMBER |