About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s016.g0174.t1INTEGRASE CORE DOMAIN CONTAINING PROTEIN
Lsat_s016.g0175.t1
Lsat_s016.g0176.t1
Lsat_s016.g0177.t1PROTEIN CBG10425
Lsat_s016.g0178.t1PHOSPHATIDYLINOSITOL TRANSFER PROTEIN
Lsat_s016.g0179.t1PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Lsat_s016.g0180.t1
Lsat_s016.g0181.t1GLUCOSE-1-PHOSPHATE THYMIDYLTRANSFERASE
Lsat_s016.g0182.t1OS10G0105400 PROTEIN
Lsat_s016.g0183.t1OS10G0105400 PROTEIN
Lsat_s016.g0184.t1FMRFAMIDE RECEPTOR-RELATED
Lsat_s016.g0185.t1
Lsat_s016.g0186.t1THREONINE DEHYDRATASE, MITOCHONDRIAL-RELATED
Lsat_s016.g0187.t1
Lsat_s016.g0188.t1UNC-93 RELATED
Lsat_s016.g0189.t1
Lsat_s016.g0190.t1UNC-93 RELATED
Lsat_s016.g0191.t1
Lsat_s016.g0192.t1GPI TRANSAMIDASE COMPONENT PIG-S
Lsat_s016.g0193.t1ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Lsat_s016.g0194.t1GOS-28 SNARE- RELATED
Lsat_s016.g0195.t1METHYLTRANSFERASE
Lsat_s016.g0196.t1CALPONIN
Lsat_s016.g0197.t1UNCHARACTERIZED
Lsat_s016.g0198.t1ADAM10/ADAM17 METALLOPEPTIDASE FAMILY MEMBER
Lsat_s016.g0199.t1
Lsat_s016.g0200.t1RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN
Lsat_s016.g0201.t1DYNEIN LIGHT CHAIN
Lsat_s016.g0202.t1METHYLTRANSFERASE
Lsat_s016.g0203.t1APOPTOSIS-INDUCING FACTOR 1
Lsat_s016.g0204.t1MEVALONATE KINASE
Lsat_s016.g0205.t1MYOSIN
Lsat_s016.g0206.t1
Lsat_s016.g0207.t1
Lsat_s016.g0208.t1-
Lsat_s016.g0209.t1
Lsat_s016.g0210.t1
Lsat_s016.g0211.t1
Lsat_s016.g0212.t1
Lsat_s016.g0213.t1
Lsat_s016.g0214.t1
Lsat_s016.g0215.t1
Lsat_s016.g0216.t1SERINE/ARGININE REPETITIVE MATRIX PROTEIN 3-RELATED
Lsat_s016.g0217.t1TRICHOPLEIN KERATIN FILAMENT-BINDING PROTEIN FAMILY MEMBER
Lsat_s016.g0218.t1TRNA (URACIL-5-)-METHYLTRANSFERASE
Lsat_s016.g0219.t1RAN BINDING PROTEIN
Lsat_s016.g0220.t1
Lsat_s016.g0221.t1
Lsat_s016.g0222.t1-
Lsat_s016.g0223.t1DAUER UP-REGULATED-RELATED
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