About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s017.g0398.t1
Lsat_s017.g0399.t1
Lsat_s017.g0400.t1
Lsat_s017.g0401.t1
Lsat_s017.g0402.t1PROTEIN SIDEKICK
Lsat_s017.g0403.t1PHOSPHOGLYCERATE MUTASE-RELATED
Lsat_s017.g0404.t1IFT57/HIPPI
Lsat_s017.g0405.t1HAUS AUGMIN-LIKE COMPLEX SUBUNIT 5
Lsat_s017.g0406.t1THISBE
Lsat_s017.g0407.t1HAUS AUGMIN-LIKE COMPLEX SUBUNIT 5
Lsat_s017.g0408.t1TETRATRICOPEPTIDE REPEAT PROTEIN 12
Lsat_s017.g0409.t1OLIGOSACCHARYLTRANSFERASE COMPLEX SUBUNIT OSTC
Lsat_s017.g0410.t1MANNOSYL-OLIGOSACCHARIDE ALPHA-1,2-MANNOSIDASE-RELATED
Lsat_s017.g0411.t1BREAST CANCER ANTI-ESTROGEN RESISTANCE PROTEIN 3 HOMOLOG-LIKE PROTEIN
Lsat_s017.g0412.t1CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44)
Lsat_s017.g0413.t1
Lsat_s017.g0414.t1
Lsat_s017.g0415.t1PROTEIN CBG26694
Lsat_s017.g0416.t1SH3 DOMAIN-CONTAINING
Lsat_s017.g0417.t1RIKEN CDNA 4933430I17 GENE
Lsat_s017.g0418.t1
Lsat_s017.g0419.t1ACROSIN-RELATED
Lsat_s017.g0420.t1ACROSIN-RELATED
Lsat_s017.g0421.t1ACROSIN-RELATED
Lsat_s017.g0422.t1ACROSIN-RELATED
Lsat_s017.g0423.t1ACROSIN-RELATED
Lsat_s017.g0424.t1ELONGATION FACTOR TU-RELATED
Lsat_s017.g0425.t1OPSIN
Lsat_s017.g0426.t1OPSIN
Lsat_s017.g0427.t1ACROSIN-RELATED
Lsat_s017.g0428.t1TRYPSIN-RELATED
Lsat_s017.g0429.t1DENTIN SIALOPHOSPHOPROTEIN
Lsat_s017.g0430.t1SERINE/THREONINE PROTEIN KINASE
Lsat_s017.g0431.t1
Lsat_s017.g0432.t1ACROSIN-RELATED
Lsat_s017.g0433.t1TRANSMEMBRANE PROTEASE SERINE
Lsat_s017.g0434.t1ACROSIN-RELATED
Lsat_s017.g0435.t1ACROSIN-RELATED
Lsat_s017.g0436.t1
Lsat_s017.g0437.t1ACROSIN-RELATED
Lsat_s017.g0438.t1
Lsat_s017.g0439.t1UNCHARACTERIZED
Lsat_s017.g0440.t1NEURAL PROLIFERATION DIFFERENTIATION AND CONTROL PROTEIN-1 NPDC-1 PROTEIN
Lsat_s017.g0441.t1BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
Lsat_s017.g0442.t1POU DOMAIN
Lsat_s017.g0443.t1
Lsat_s017.g0444.t1SPORE COAT PROTEIN SP85
Lsat_s017.g0445.t1
Lsat_s017.g0446.t1
Lsat_s017.g0447.t1
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