About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s018.g0363.t1BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR
Lsat_s018.g0364.t1MANNOSYL PHOSPHORYLINOSITOL CERAMIDE SYNTHASE
Lsat_s018.g0365.t1DNA LIGASE
Lsat_s018.g0366.t1AN1-TYPE ZINC FINGER PROTEIN
Lsat_s018.g0367.t1
Lsat_s018.g0368.t1LYSOSOMAL-ASSOCIATED TRANSMEMBRANE PROTEIN
Lsat_s018.g0369.t1OXIDATIVE STRESS-RESPONSE SERINE-RICH PROTEIN 1
Lsat_s018.g0370.t1ZINC FINGER AND SCAN DOMAIN-CONTAINING
Lsat_s018.g0371.t1
Lsat_s018.g0372.t1
Lsat_s018.g0373.t1TATA-BOX BINDING PROTEIN
Lsat_s018.g0374.t1
Lsat_s018.g0375.t1
Lsat_s018.g0376.t1
Lsat_s018.g0377.t1
Lsat_s018.g0378.t1RUN AND SH3 DOMAIN CONTAINING
Lsat_s018.g0379.t1
Lsat_s018.g0380.t1NAD(P)H-HYDRATE EPIMERASE
Lsat_s018.g0381.t1
Lsat_s018.g0382.t1
Lsat_s018.g0383.t1
Lsat_s018.g0384.t1FIBROIN HEAVY CHAIN FIB-H LIKE PROTEIN
Lsat_s018.g0385.t1
Lsat_s018.g0386.t1MOLTING PROTEIN MLT-4
Lsat_s018.g0387.t1CALCIUM BINDING PROTEIN
Lsat_s018.g0388.t1FERREDOXIN-RELATED
Lsat_s018.g0389.t14-NITROPHENYLPHOSPHATASE-RELATED
Lsat_s018.g0390.t1CALPAIN
Lsat_s018.g0391.t1
Lsat_s018.g0392.t1RHO GTPASE-ACTIVATING PROTEIN 100F
Lsat_s018.g0393.t1
Lsat_s018.g0394.t1RHO GTPASE-ACTIVATING PROTEIN 100F
Lsat_s018.g0395.t1
Lsat_s018.g0396.t1
Lsat_s018.g0397.t1
Lsat_s018.g0398.t1FANCONI ANEMIA GROUP C PROTEIN FANCC
Lsat_s018.g0399.t1GEO07743P1
Lsat_s018.g0400.t1
Lsat_s018.g0401.t1BTB/POZ DOMAIN-CONTAINING PROTEIN 19
Lsat_s018.g0402.t1LISH DOMAIN-CONTAINING PROTEIN
Lsat_s018.g0403.t1RHO-GTPASE-ACTIVATING PROTEIN LRG1
Lsat_s018.g0404.t1HISTIDINE-RICH GLYCOPROTEIN
Lsat_s018.g0405.t1RHO-GTPASE-ACTIVATING PROTEIN LRG1
Lsat_s018.g0406.t1
Lsat_s018.g0407.t1
Lsat_s018.g0408.t1PROTEIN CBG17025
Lsat_s018.g0409.t1
Lsat_s018.g0410.t1
Lsat_s018.g0411.t1POLYCOMB GROUP PROTEIN
Lsat_s018.g0412.t1PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE
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