About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s019.g0032.t160S RIBOSOMAL PROTEIN L13
Lsat_s019.g0033.t1LEUCYL-TRNA SYNTHETASE
Lsat_s019.g0034.t1ZGC:162297
Lsat_s019.g0035.t1CYCLINS
Lsat_s019.g0036.t1TYROSINE-PROTEIN KINASE
Lsat_s019.g0037.t1TYROSINE-PROTEIN KINASE
Lsat_s019.g0038.t1TYROSINE-PROTEIN KINASE
Lsat_s019.g0039.t1TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4
Lsat_s019.g0040.t1SCD6 PROTEIN-RELATED
Lsat_s019.g0041.t160 KDA RIBONUCLEOPROTEIN SSA/RO
Lsat_s019.g0042.t160 KDA RIBONUCLEOPROTEIN SSA/RO
Lsat_s019.g0043.t160 KDA RIBONUCLEOPROTEIN SSA/RO
Lsat_s019.g0044.t1CALCIUM BINDING PROTEINS
Lsat_s019.g0045.t1ARYLSULFATASE
Lsat_s019.g0046.t1
Lsat_s019.g0047.t1ZINC METALLOPROTEASE FAMILY M13 NEPRILYSIN-RELATED
Lsat_s019.g0048.t1POLY [ADP-RIBOSE] POLYMERASE
Lsat_s019.g0049.t1RIBONUCLEASE
Lsat_s019.g0050.t1UNCHARACTERIZED
Lsat_s019.g0051.t1NUCLEAR RECEPTOR COACTIVATOR 5-RELATED
Lsat_s019.g0052.t1
Lsat_s019.g0053.t1UNCHARACTERIZED
Lsat_s019.g0054.t1SORTING NEXIN 20, 21
Lsat_s019.g0055.t1
Lsat_s019.g0056.t1
Lsat_s019.g0057.t1TUMOR PROTEIN P63-REGULATED GENE 1-LIKE PROTEIN
Lsat_s019.g0058.t1WD REPEAT PROTEIN 8-RELATED
Lsat_s019.g0059.t1CELLULAR TUMOR ANTIGEN P53
Lsat_s019.g0060.t1
Lsat_s019.g0061.t1VEPH-A/MELTED
Lsat_s019.g0062.t139S RIBOSOMAL PROTEIN L20
Lsat_s019.g0063.t1NIBRIN-RELATED
Lsat_s019.g0064.t1OS02G0815200 PROTEIN
Lsat_s019.g0065.t1ORIGIN RECOGNITION COMPLEX SUBUNIT 6
Lsat_s019.g0066.t1D-LACTATE DEHYDROGENASE
Lsat_s019.g0067.t160S RIBOSOMAL PROTEIN L14
Lsat_s019.g0068.t1TESTOSTERONE-REGULATED PROTEIN RP2
Lsat_s019.g0069.t1OXA1
Lsat_s019.g0070.t1RNA POLYMERASE II NUCLEAR LOCALIZATION PROTEIN SLC7A6OS-RELATED
Lsat_s019.g0071.t1EGF-LIKE DOMAIN-CONTAINING PROTEIN
Lsat_s019.g0072.t1STROMAL ANTIGEN
Lsat_s019.g0073.t1PR DOMAIN ZINC FINGER PROTEIN
Lsat_s019.g0074.t1
Lsat_s019.g0075.t1PROTEIN CBG17025
Lsat_s019.g0076.t1
Lsat_s019.g0077.t1
Lsat_s019.g0078.t1
Lsat_s019.g0079.t1
Lsat_s019.g0080.t1
Lsat_s019.g0081.t1SAL-LIKE PROTEIN
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