About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s019.g0132.t1TOLL-LIKE RECEPTOR
Lsat_s019.g0133.t1SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Lsat_s019.g0134.t1BONE MARROW PROTEOGLYCAN
Lsat_s019.g0135.t1PANTOTHENATE KINASE
Lsat_s019.g0136.t1
Lsat_s019.g0137.t1
Lsat_s019.g0138.t1BETA-1,4-GALACTOSYLTRANSFERASE
Lsat_s019.g0139.t1
Lsat_s019.g0140.t1
Lsat_s019.g0141.t1PROTEIN GAMETE EXPRESSED 1
Lsat_s019.g0142.t1FUMARATE HYDRATASE-RELATED
Lsat_s019.g0143.t1BONUS, ISOFORM C-RELATED
Lsat_s019.g0144.t1FUMARATE HYDRATASE-RELATED
Lsat_s019.g0145.t1MONOCARBOXYLATE TRANSPORTER
Lsat_s019.g0146.t1
Lsat_s019.g0147.t1AGAP000281-PA
Lsat_s019.g0148.t1-
Lsat_s019.g0149.t1ZINC FINGER PROTEIN
Lsat_s019.g0150.t1PIG-M MANNOSYLTRANSFERASE
Lsat_s019.g0151.t1UBIQUITIN-CONJUGATING ENZYME E2
Lsat_s019.g0152.t1MOLTING PROTEIN MLT-4
Lsat_s019.g0153.t1
Lsat_s019.g0154.t1
Lsat_s019.g0155.t1GTP-BINDING PROTEIN ALPHA SUBUNIT
Lsat_s019.g0156.t1NUCLEAR PORE COMPLEX PROTEIN SEC13 / SEH1 FAMILY MEMBER
Lsat_s019.g0157.t1NEURALIZED
Lsat_s019.g0158.t1
Lsat_s019.g0159.t1
Lsat_s019.g0160.t1CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 9
Lsat_s019.g0161.t1RETINOBLASTOMA-ASSOCIATED PROTEIN RB -RELATED
Lsat_s019.g0162.t1
Lsat_s019.g0163.t1
Lsat_s019.g0164.t1
Lsat_s019.g0165.t1
Lsat_s019.g0166.t1-
Lsat_s019.g0167.t1COLLAGEN ALPHA
Lsat_s019.g0168.t1
Lsat_s019.g0169.t1KREMEN PROTEIN
Lsat_s019.g0170.t1
Lsat_s019.g0171.t1
Lsat_s019.g0172.t1
Lsat_s019.g0173.t1AG-1 BLOOD STAGE MEMBRANE PROTEIN HOMOLOGUE
Lsat_s019.g0174.t1
Lsat_s019.g0175.t1RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Lsat_s019.g0176.t1CALCIUM-INDEPENDENT PHOSPHOLIPASE A2 IPLA2 -RELATED
Lsat_s019.g0177.t1
Lsat_s019.g0178.t1
Lsat_s019.g0179.t1
Lsat_s019.g0180.t1
Lsat_s019.g0181.t1AGAP007537-PB
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