About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s019.g0182.t1
Lsat_s019.g0183.t1
Lsat_s019.g0184.t1BONE MARROW PROTEOGLYCAN
Lsat_s019.g0185.t1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Lsat_s019.g0186.t160 KDA RIBONUCLEOPROTEIN SSA/RO
Lsat_s019.g0187.t1UREASE ACCESSORY PROTEIN G
Lsat_s019.g0188.t1UREASE
Lsat_s019.g0189.t1
Lsat_s019.g0190.t1
Lsat_s019.g0191.t1
Lsat_s019.g0192.t1
Lsat_s019.g0193.t1
Lsat_s019.g0194.t1
Lsat_s019.g0195.t1CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED
Lsat_s019.g0196.t1TRANSLOCON-ASSOCIATED PROTEIN TRAP , GAMMA SUBUNIT
Lsat_s019.g0197.t1
Lsat_s019.g0198.t1
Lsat_s019.g0199.t1
Lsat_s019.g0200.t1
Lsat_s019.g0201.t1
Lsat_s019.g0202.t1
Lsat_s019.g0203.t11,4-DIHYDROXY-2-NAPHTHOATE OCTAPRENYLTRANSFERASE
Lsat_s019.g0204.t1ATAXIA TELANGIECTASIA MUTATED ATM -RELATED
Lsat_s019.g0205.t1AURORA KINASE A-INTERACTING PROTEIN
Lsat_s019.g0206.t1SOX TRANSCRIPTION FACTOR
Lsat_s019.g0207.t1
Lsat_s019.g0208.t1PROTEIN CBG03580
Lsat_s019.g0209.t1-
Lsat_s019.g0210.t1
Lsat_s019.g0211.t1ENVOPLAKIN
Lsat_s019.g0212.t1CYTOSKELETON-ASSOCIATED PROTEIN 2-LIKE
Lsat_s019.g0213.t1MARVEL-CONTAINING POTENTIAL LIPID RAFT-ASSOCIATED PROTEIN
Lsat_s019.g0214.t1
Lsat_s019.g0215.t1MARVEL-CONTAINING POTENTIAL LIPID RAFT-ASSOCIATED PROTEIN
Lsat_s019.g0216.t1-
Lsat_s019.g0217.t1
Lsat_s019.g0218.t1
Lsat_s019.g0219.t1VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
Lsat_s019.g0220.t1
Lsat_s019.g0221.t1ZINC METALLOPROTEASE FAMILY M13 NEPRILYSIN-RELATED
Lsat_s019.g0222.t1ZINC METALLOPROTEASE FAMILY M13 NEPRILYSIN-RELATED
Lsat_s019.g0223.t1
Lsat_s019.g0224.t1HEAVY CHAIN, PUTATIVE-RELATED
Lsat_s019.g0225.t1CATION-TRANSPORTING ATPASE-RELATED
Lsat_s019.g0226.t1
Lsat_s019.g0227.t1
Lsat_s019.g0228.t1METALLO PHOSPHOESTERASE RELATED
Lsat_s019.g0229.t1LEUCINE-RICH REPEAT-CONTAINING PROTEIN 34
Lsat_s019.g0230.t1METAXIN RELATED
Lsat_s019.g0231.t1HEAT SHOCK TRANSCRIPTION FACTOR
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