About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s019.g0082.t1ZINC FINGER PROTEIN
Lsat_s019.g0083.t1UBIQUITIN-ACTIVATING ENZYME E1
Lsat_s019.g0084.t1CDC73 DOMAIN PROTEIN
Lsat_s019.g0085.t1CDC73 DOMAIN PROTEIN
Lsat_s019.g0086.t1SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED
Lsat_s019.g0087.t1ZINC FINGER PROTEIN
Lsat_s019.g0088.t1EUKARYOTIC TRANSLATION INITIATION FACTOR 6
Lsat_s019.g0089.t1PROTEIN C8ORF37
Lsat_s019.g0090.t1CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL
Lsat_s019.g0091.t1
Lsat_s019.g0092.t1CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL
Lsat_s019.g0093.t1CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL
Lsat_s019.g0094.t1DAP3-BINDING CELL DEATH ENHANCER 1
Lsat_s019.g0095.t1BUD13 HOMOLOG
Lsat_s019.g0096.t1MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED
Lsat_s019.g0097.t1ARRESTIN DOMAIN CONTAINING PROTEIN
Lsat_s019.g0098.t1
Lsat_s019.g0099.t1FORKHEAD BOX PROTEIN BINIOU
Lsat_s019.g0100.t1
Lsat_s019.g0101.t1DUAL SPECIFICITY PROTEIN KINASE
Lsat_s019.g0102.t1PROTEIN DISULFIDE-ISOMERASE TMX3
Lsat_s019.g0103.t1COILED-COIL DOMAIN-CONTAINING PROTEIN 102A
Lsat_s019.g0104.t1KRAB AND ZINC FINGER DOMAIN-CONTAINING
Lsat_s019.g0105.t1PROTEASE FAMILY M14 CARBOXYPEPTIDASE A,B
Lsat_s019.g0106.t1PROTEASE FAMILY M14 CARBOXYPEPTIDASE A,B
Lsat_s019.g0107.t1
Lsat_s019.g0108.t1
Lsat_s019.g0109.t1ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 18
Lsat_s019.g0110.t1RNA RECOGNITION MOTIF-CONTAINING
Lsat_s019.g0111.t1
Lsat_s019.g0112.t1EGF-LIKE DOMAIN-CONTAINING PROTEIN
Lsat_s019.g0113.t1
Lsat_s019.g0114.t1LISH DOMAIN-CONTAINING PROTEIN ARMC9
Lsat_s019.g0115.t1UNCHARACTERIZED
Lsat_s019.g0116.t1ALANINE AMINOTRANSFERASE
Lsat_s019.g0117.t1N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE
Lsat_s019.g0118.t1MDM2-BINDING PROTEIN
Lsat_s019.g0119.t1BETA-CATENIN-LIKE PROTEIN 1 NUCLEAR ASSOCIATED PROTEIN
Lsat_s019.g0120.t1LYSINE-SPECIFIC DEMETHYLASE
Lsat_s019.g0121.t1GPI TRANSAMIDASE COMPONENT PIG-T-RELATED
Lsat_s019.g0122.t1TRANSMEMBRANE PROTEIN 64
Lsat_s019.g0123.t1SCAVENGER RECEPTOR CLASS B TYPE-1 SR-B1
Lsat_s019.g0124.t1EGF-LIKE DOMAIN-CONTAINING PROTEIN
Lsat_s019.g0125.t1HILLARIN
Lsat_s019.g0126.t1ANK_REP_REGION DOMAIN-CONTAINING PROTEIN
Lsat_s019.g0127.t1
Lsat_s019.g0128.t1TETRATRICOPEPTIDE REPEAT PROTEIN 5
Lsat_s019.g0129.t1
Lsat_s019.g0130.t1CRUMBS FAMILY MEMBER
Lsat_s019.g0131.t1
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