About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s019.g0232.t1RIBOSOME BIOGENESIS PROTEIN BOP1 BLOCK OF PROLIFERATION 1 PROTEIN
Lsat_s019.g0233.t1CD72-RELATED
Lsat_s019.g0234.t1
Lsat_s019.g0235.t1
Lsat_s019.g0236.t1DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
Lsat_s019.g0237.t1DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
Lsat_s019.g0238.t1
Lsat_s019.g0239.t1DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
Lsat_s019.g0240.t1
Lsat_s019.g0241.t1
Lsat_s019.g0242.t1DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
Lsat_s019.g0243.t1
Lsat_s019.g0244.t1
Lsat_s019.g0245.t1MYOTROPHIN
Lsat_s019.g0246.t1
Lsat_s019.g0247.t1TRANSCRIPTION FACTOR SPT20 HOMOLOG
Lsat_s019.g0248.t1PROTEASE FAMILY M14 CARBOXYPEPTIDASE A,B
Lsat_s019.g0249.t1
Lsat_s019.g0250.t1S-ANTIGEN PROTEIN
Lsat_s019.g0251.t1PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Lsat_s019.g0252.t1
Lsat_s019.g0253.t1
Lsat_s019.g0254.t1
Lsat_s019.g0255.t1PROTECTION OF TELOMERES 1
Lsat_s019.g0256.t1ARYLSULFATASE FAMILY MEMBER
Lsat_s019.g0257.t1CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN
Lsat_s019.g0258.t1TRANSCRIPTION TERMINATION FACTOR, MITOCHONDRIAL
Lsat_s019.g0259.t1ALANYL-TRNA SYNTHETASE
Lsat_s019.g0260.t1
Lsat_s019.g0261.t1CADHERIN-87A
Lsat_s019.g0262.t1
Lsat_s019.g0263.t1
Lsat_s019.g0264.t1CADHERIN-87A
Lsat_s019.g0265.t1TRANSCRIPTION TERMINATION FACTOR, MITOCHONDRIAL
Lsat_s019.g0266.t1UNCHARACTERIZED
Lsat_s019.g0267.t1YBAK DOMAIN-CONTAINING PROTEIN
Lsat_s019.g0268.t1RIBOSOMAL PROTEIN S6 KINASE
Lsat_s019.g0269.t1HOOK PROTEINS
Lsat_s019.g0270.t1SPHINGOMYELIN PHOSPHODIESTERASE
Lsat_s019.g0271.t1HOOK PROTEINS
Lsat_s019.g0272.t1
Lsat_s019.g0273.t1HYPOXIA-INDUCIBLE FACTOR 1 ALPHA
Lsat_s019.g0274.t1
Lsat_s019.g0275.t1TETRASPANIN
Lsat_s019.g0276.t1YLP MOTIF CONTAINING PROTEIN NUCLEAR PROTEIN ZAP
Lsat_s019.g0277.t1YLP MOTIF CONTAINING PROTEIN NUCLEAR PROTEIN ZAP
Lsat_s019.g0278.t1
Lsat_s019.g0279.t1AAA-FAMILY ATPASE
Lsat_s019.g0280.t1DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER
Lsat_s019.g0281.t1
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