About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s019.g0482.t1
Lsat_s019.g0483.t1
Lsat_s019.g0484.t1FOS TRANSCRIPTION FACTOR-RELATED
Lsat_s019.g0485.t1
Lsat_s019.g0486.t1
Lsat_s019.g0487.t1
Lsat_s019.g0488.t1FOS TRANSCRIPTION FACTOR-RELATED
Lsat_s019.g0489.t1
Lsat_s019.g0490.t1
Lsat_s019.g0491.t1FOS TRANSCRIPTION FACTOR-RELATED
Lsat_s019.g0492.t1FOS TRANSCRIPTION FACTOR-RELATED
Lsat_s019.g0493.t1DNA-DIRECTED RNA POLYMERASE
Lsat_s019.g0494.t1RIBOSOME BINDING PROTEIN-1
Lsat_s019.g0495.t1ENOLASE-PHOSPHATASE E1
Lsat_s019.g0496.t1
Lsat_s019.g0497.t1KINESIN LIGHT CHAIN
Lsat_s019.g0498.t1
Lsat_s019.g0499.t1EUKARYOTIC TRANSLATION INITIATION FACTOR
Lsat_s019.g0500.t1UBIQUINOL-CYTOCHROME-C REDUCTASE COMPLEX ASSEMBLY FACTOR 2
Lsat_s019.g0501.t1
Lsat_s019.g0502.t1ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL
Lsat_s019.g0503.t1LD33804P
Lsat_s019.g0504.t1RAD54-LIKE
Lsat_s019.g0505.t1
Lsat_s019.g0506.t1PEPTIDASE
Lsat_s019.g0507.t1PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Lsat_s019.g0508.t1ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 14
Lsat_s019.g0509.t1
Lsat_s019.g0510.t1H2.0-LIKE HOMEOBOX PROTEIN
Lsat_s019.g0511.t1
Lsat_s019.g0512.t1
Lsat_s019.g0513.t1TETRATRICOPEPTIDE REPEAT PROTEIN 13
Lsat_s019.g0514.t1RNA-BINDING PROTEIN
Lsat_s019.g0515.t1DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN
Lsat_s019.g0516.t1
Lsat_s019.g0517.t1
Lsat_s019.g0518.t1ATILLA, ISOFORM B-RELATED-RELATED
Lsat_s019.g0519.t1
Lsat_s019.g0520.t1
Lsat_s019.g0521.t1PYRUVATE CARBOXYLASE
Lsat_s019.g0522.t1ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN
Lsat_s019.g0523.t1TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 6
Lsat_s019.g0524.t1
Lsat_s019.g0525.t1
Lsat_s019.g0526.t1
Lsat_s019.g0527.t1
Lsat_s019.g0528.t1
Lsat_s019.g0529.t1UNCHARACTERIZED
Lsat_s019.g0530.t1
Lsat_s019.g0531.t1WHEY ACDIC PROTEIN WAP
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