About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s019.g0532.t1
Lsat_s019.g0533.t1WHEY ACDIC PROTEIN WAP
Lsat_s019.g0534.t1WAP FOUR-DISULFIDE CORE DOMAIN PROTEIN 8
Lsat_s019.g0535.t1KUNITZ-TYPE PROTEASE INHIBITOR-RELATED
Lsat_s019.g0536.t1EPPIN
Lsat_s019.g0537.t1
Lsat_s019.g0538.t1
Lsat_s019.g0539.t1KUNITZ-TYPE PROTEASE INHIBITOR-RELATED
Lsat_s019.g0540.t1
Lsat_s019.g0541.t1KUNITZ-TYPE PROTEASE INHIBITOR-RELATED
Lsat_s019.g0542.t1-
Lsat_s019.g0543.t1HECT DOMAIN UBIQUITIN-PROTEIN LIGASE
Lsat_s019.g0544.t1LEUCINE RICH REPEAT FAMILY PROTEIN
Lsat_s019.g0545.t1LEUCINE RICH REPEAT FAMILY PROTEIN
Lsat_s019.g0546.t1LEUCINE RICH REPEAT FAMILY PROTEIN
Lsat_s019.g0547.t1UNCHARACTERIZED
Lsat_s019.g0548.t1LEUCINE RICH REPEAT FAMILY PROTEIN
Lsat_s019.g0549.t1LEUCINE RICH REPEAT FAMILY PROTEIN
Lsat_s020.g0001.t1
Lsat_s020.g0002.t1
Lsat_s020.g0003.t1
Lsat_s020.g0004.t1ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 7
Lsat_s020.g0005.t1
Lsat_s020.g0006.t1PROTEIN-TYROSINE SULFOTRANSFERASE 2
Lsat_s020.g0007.t1ARGININOSUCCINATE LYASE
Lsat_s020.g0008.t1
Lsat_s020.g0009.t1
Lsat_s020.g0010.t1
Lsat_s020.g0011.t1
Lsat_s020.g0012.t1
Lsat_s020.g0013.t1DNA2/NAM7 HELICASE FAMILY
Lsat_s020.g0014.t1-
Lsat_s020.g0015.t1
Lsat_s020.g0016.t1
Lsat_s020.g0017.t1
Lsat_s020.g0018.t1
Lsat_s020.g0019.t1MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATED
Lsat_s020.g0020.t1
Lsat_s020.g0021.t1
Lsat_s020.g0022.t1
Lsat_s020.g0023.t1NEUROLIGIN
Lsat_s020.g0024.t1
Lsat_s020.g0025.t1
Lsat_s020.g0026.t1NEUROLIGIN
Lsat_s020.g0027.t1NEUROLIGIN
Lsat_s020.g0028.t1WD40 REPEAT PROTEIN
Lsat_s020.g0029.t1
Lsat_s020.g0030.t1
Lsat_s020.g0031.t1RIM BINDING PROTEIN-RELATED
Lsat_s020.g0032.t1
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