About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s020.g0133.t1INTELECTIN
Lsat_s020.g0134.t1
Lsat_s020.g0135.t1TRANS-GOLGI NETWORK INTEGRAL MEMBRANE PROTEIN TGN38
Lsat_s020.g0136.t1TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 2
Lsat_s020.g0137.t1
Lsat_s020.g0138.t1LEISHMANOLYSIN-LIKE PEPTIDASE
Lsat_s020.g0139.t1LEISHMANOLYSIN-LIKE PEPTIDASE
Lsat_s020.g0140.t1RING FINGER PROTEIN 32
Lsat_s020.g0141.t1H2HPP ISOMERASE
Lsat_s020.g0142.t1UNCHARACTERIZED
Lsat_s020.g0143.t1F20B24.22
Lsat_s020.g0144.t1REPLICATION PROTEIN A-RELATED
Lsat_s020.g0145.t1MACROGLOBULIN / COMPLEMENT
Lsat_s020.g0146.t1ZONA PELLUCIDA BINDING PROTEIN SP38
Lsat_s020.g0147.t1
Lsat_s020.g0148.t1
Lsat_s020.g0149.t1
Lsat_s020.g0150.t1GUANYLYL CYCLASE
Lsat_s020.g0151.t1GUANYLYL CYCLASE
Lsat_s020.g0152.t1
Lsat_s020.g0153.t1GUANYLYL CYCLASE
Lsat_s020.g0154.t1HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Lsat_s020.g0155.t1GUANYLYL CYCLASE
Lsat_s020.g0156.t1-
Lsat_s020.g0157.t1
Lsat_s020.g0158.t1SPINSTER
Lsat_s020.g0159.t1RAS GTPASE-ACTIVATING PROTEINS
Lsat_s020.g0160.t1
Lsat_s020.g0161.t1TRANSMEMBRANE PROTEIN INDUCED BY TUMOR NECROSIS FACTOR ALPHA
Lsat_s020.g0162.t1UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN
Lsat_s020.g0163.t1UNCHARACTERIZED
Lsat_s020.g0164.t1
Lsat_s020.g0165.t1ALPHA-(1,3)-FUCOSYLTRANSFERASE C-RELATED
Lsat_s020.g0166.t1
Lsat_s020.g0167.t1LIPOMA HMGIC FUSION PARTNER-LIKE PROTEIN
Lsat_s020.g0168.t1
Lsat_s020.g0169.t1LIPOMA HMGIC FUSION PARTNER-LIKE PROTEIN
Lsat_s020.g0170.t1
Lsat_s020.g0171.t1
Lsat_s020.g0172.t1
Lsat_s020.g0173.t1UNCHARACTERIZED
Lsat_s020.g0174.t1PROTEIN LIN1
Lsat_s020.g0175.t1UNCHARACTERIZED
Lsat_s020.g0176.t1CLATHRIN HEAVY CHAIN RELATED
Lsat_s020.g0177.t1INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED
Lsat_s020.g0178.t1
Lsat_s020.g0179.t1
Lsat_s020.g0180.t1
Lsat_s020.g0181.t1CHITIN BINDING PERITROPHIN-A
Lsat_s020.g0182.t1
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