About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s020.g0233.t1ZINC METALLOPROTEINASE-RELATED
Lsat_s020.g0234.t1NEUROTRANSMITTER GATED ION CHANNEL
Lsat_s020.g0235.t1NEUROTRANSMITTER GATED ION CHANNEL
Lsat_s020.g0236.t1
Lsat_s020.g0237.t1NEUROTRANSMITTER GATED ION CHANNEL
Lsat_s020.g0238.t1PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Lsat_s020.g0239.t1
Lsat_s020.g0240.t1NEUROTRANSMITTER GATED ION CHANNEL
Lsat_s020.g0241.t1ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Lsat_s020.g0242.t1
Lsat_s020.g0243.t1BREAST CARCINOMA AMPLIFIED SEQUENCE 3
Lsat_s020.g0244.t1MYOSIN
Lsat_s020.g0245.t1
Lsat_s020.g0246.t1
Lsat_s020.g0247.t1CT120 PROTEIN
Lsat_s020.g0248.t1ARP2/3 COMPLEX 21 KD SUBUNIT
Lsat_s020.g0249.t1PROTEIN PHOSPHATASE
Lsat_s020.g0250.t1CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATED
Lsat_s020.g0251.t1ZINC FINGER SWIM DOMAIN-CONTAINING PROTEIN 7
Lsat_s020.g0252.t1NITRILASE C965.09-RELATED
Lsat_s020.g0253.t1GUANYLYL CYCLASE DOMAIN CONTAINING PROTEIN 1 GUCD1
Lsat_s020.g0254.t1
Lsat_s020.g0255.t1EUKARYOTIC TRANSLATION INITIATION FACTOR 4E TRANSPORTER
Lsat_s020.g0256.t1DEVELOPMENTALLY-REGULATED GTP-BINDING PROTEIN 2
Lsat_s020.g0257.t1ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 13
Lsat_s020.g0258.t1G PROTEIN-COUPLED RECEPTOR KINASE INTERACTING ARFGAP
Lsat_s020.g0259.t1INO80 COMPLEX SUBUNIT B
Lsat_s020.g0260.t1
Lsat_s020.g0261.t1RIBONUCLEASE III
Lsat_s020.g0262.t1MITOCHONDRIAL RIBOSOMAL PROTEIN 63
Lsat_s020.g0263.t1ELONGATION FACTOR TU-RELATED
Lsat_s020.g0264.t1NUCLEAR SPECKLE SPLICING REGULATORY PROTEIN 1
Lsat_s020.g0265.t1BONUS, ISOFORM C-RELATED
Lsat_s020.g0266.t1REQUIRED FOR MEIOTIC NUCLEAR DIVISION PROTEIN 1 HOMOLOG
Lsat_s020.g0267.t1RAN BINDING PROTEIN
Lsat_s020.g0268.t1STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER
Lsat_s020.g0269.t1PROTEIN PHOSPHATASE 2C
Lsat_s020.g0270.t1LUNG CANCER METASTASIS-RELATED LCMR1 PROTEIN
Lsat_s020.g0271.t1MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASE
Lsat_s020.g0272.t1TNF RECEPTOR ASSOCIATED FACTOR
Lsat_s020.g0273.t1SPERMATOGENESIS-ASSOCIATED PROTEIN 22
Lsat_s020.g0274.t1SUPPRESSOR OF TY 4
Lsat_s020.g0275.t1BOMBESIN RECEPTOR-ACTIVATED PROTEIN C6ORF89
Lsat_s020.g0276.t1TP53-REGULATED INHIBITOR OF APOPTOSIS 1
Lsat_s020.g0277.t1
Lsat_s020.g0278.t1
Lsat_s020.g0279.t1
Lsat_s020.g0280.t1
Lsat_s020.g0281.t1RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Lsat_s020.g0282.t1VITAMIN K EPOXIDE REDUCTASE COMPLEX, SUBUNIT 1
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