About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s021.g0023.t1
Lsat_s021.g0024.t1
Lsat_s021.g0025.t1
Lsat_s021.g0026.t1ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 7
Lsat_s021.g0027.t1ZINC FINGER PROTEIN 593
Lsat_s021.g0028.t1BONE MARROW PROTEOGLYCAN
Lsat_s021.g0029.t1SI:CH211-266K2.1
Lsat_s021.g0030.t1
Lsat_s021.g0031.t1
Lsat_s021.g0032.t1
Lsat_s021.g0033.t1
Lsat_s021.g0034.t1IMPORTIN ALPHA
Lsat_s021.g0035.t1COILED-COIL DOMAIN-CONTAINING PROTEIN 58
Lsat_s021.g0036.t1GROWTH AND TRANSFORMATION-DEPENDENT PROTEIN
Lsat_s021.g0037.t1GROWTH AND TRANSFORMATION-DEPENDENT PROTEIN
Lsat_s021.g0038.t1
Lsat_s021.g0039.t1RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN
Lsat_s021.g0040.t1INTEGRASE CORE DOMAIN CONTAINING PROTEIN
Lsat_s021.g0041.t1
Lsat_s021.g0042.t1PROTEIN CBG10425
Lsat_s021.g0043.t1
Lsat_s021.g0044.t1PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-LIKE 4
Lsat_s021.g0045.t1
Lsat_s021.g0046.t1
Lsat_s021.g0047.t1BETA-1,4-GALACTOSYLTRANSFERASE
Lsat_s021.g0048.t1ARMADILLO-TYPE FOLD-RELATED
Lsat_s021.g0049.t1C2H2-TYPE DOMAIN-CONTAINING PROTEIN
Lsat_s021.g0050.t1ARMADILLO-TYPE FOLD-RELATED
Lsat_s021.g0051.t1FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS
Lsat_s021.g0052.t1YIPPEE DOMAIN-CONTAINING PROTEIN
Lsat_s021.g0053.t1UNCHARACTERIZED
Lsat_s021.g0054.t1
Lsat_s021.g0055.t1
Lsat_s021.g0056.t1PEST PROTEOLYTIC SIGNAL-CONTAINING NUCLEAR PROTEIN
Lsat_s021.g0057.t1RHO GTPASE-ACTIVATING PROTEIN 68F
Lsat_s021.g0058.t1
Lsat_s021.g0059.t1RYANODINE RECEPTOR AND IP3 RECEPTOR
Lsat_s021.g0060.t1
Lsat_s021.g0061.t1
Lsat_s021.g0062.t1
Lsat_s021.g0063.t1
Lsat_s021.g0064.t1
Lsat_s021.g0065.t1
Lsat_s021.g0066.t1
Lsat_s021.g0067.t1ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL
Lsat_s021.g0068.t1UBIQUITIN-CONJUGATING ENZYME E2
Lsat_s021.g0069.t1PROTEIN CBG01349-RELATED
Lsat_s021.g0070.t1OSTEOPETROSIS ASSOCIATED TRANSMEMBRANE PROTEIN 1
Lsat_s021.g0071.t1MITOCHONDRIAL RIBOSOMAL PROTEIN S31
Lsat_s021.g0072.t1L1 TRANSPOSABLE ELEMENT-RELATED
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