About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s021.g0073.t1
Lsat_s021.g0074.t1
Lsat_s021.g0075.t1
Lsat_s021.g0076.t1OVOCHYMASE-RELATED
Lsat_s021.g0077.t1CYCLIC NUCLEOTIDE PHOSPHODIESTERASE
Lsat_s021.g0078.t1
Lsat_s021.g0079.t1
Lsat_s021.g0080.t1
Lsat_s021.g0081.t1
Lsat_s021.g0082.t1
Lsat_s021.g0083.t1
Lsat_s021.g0084.t1
Lsat_s021.g0085.t1
Lsat_s021.g0086.t1
Lsat_s021.g0087.t1PROTEIN CBG05131
Lsat_s021.g0088.t1TRANSDUCIN BETA-LIKE 3
Lsat_s021.g0089.t1SIALATE O-ACETYLESTERASE
Lsat_s021.g0090.t1IMPORTIN ALPHA
Lsat_s021.g0091.t1LIPOATE-PROTEIN LIGASE
Lsat_s021.g0092.t1ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN
Lsat_s021.g0093.t1SPLICING FACTOR SF3A-RELATED
Lsat_s021.g0094.t1HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN
Lsat_s021.g0095.t1ABC TRANSPORTER B FAMILY
Lsat_s021.g0096.t1ABC TRANSPORTER B FAMILY
Lsat_s021.g0097.t1
Lsat_s021.g0098.t1
Lsat_s021.g0099.t1ABC TRANSPORTER B FAMILY
Lsat_s021.g0100.t1COLLAGEN IV NC1 DOMAIN-CONTAINING PROTEIN
Lsat_s021.g0101.t1
Lsat_s021.g0102.t1ABC TRANSPORTER B FAMILY
Lsat_s021.g0103.t1
Lsat_s021.g0104.t1TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6
Lsat_s021.g0105.t1ZINC FINGER PROTEIN
Lsat_s021.g0106.t1GH3 DOMAIN-CONTAINING PROTEIN
Lsat_s021.g0107.t1GH3 DOMAIN-CONTAINING PROTEIN
Lsat_s021.g0108.t1ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL
Lsat_s021.g0109.t1DEHYDRODOLICHYL DIPHOSPHATE SYNTHASE FAMILY MEMBER
Lsat_s021.g0110.t1WD REPEAT DOMAIN 9
Lsat_s021.g0111.t1AP ENDONUCLEASE
Lsat_s021.g0112.t1URIDINE KINASE
Lsat_s021.g0113.t1
Lsat_s021.g0114.t1CYCLIN-DEPENDENT KINASE INHIBITOR 1
Lsat_s021.g0115.t1
Lsat_s021.g0116.t1-
Lsat_s021.g0117.t1
Lsat_s021.g0118.t1
Lsat_s021.g0119.t1
Lsat_s021.g0120.t1
Lsat_s021.g0121.t1
Lsat_s021.g0122.t1
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