About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s020.g0183.t1
Lsat_s020.g0184.t1
Lsat_s020.g0185.t1
Lsat_s020.g0186.t1MYOTONIC DYSTROPHY S/T KINASE-RELATED
Lsat_s020.g0187.t1BICD FAMILY-LIKE CARGO ADAPTER
Lsat_s020.g0188.t1PROTEIN LIAT1
Lsat_s020.g0189.t1EXONUCLEASE V
Lsat_s020.g0190.t1PEROXISOMAL SARCOSINE OXIDASE
Lsat_s020.g0191.t1
Lsat_s020.g0192.t1
Lsat_s020.g0193.t1
Lsat_s020.g0194.t1
Lsat_s020.g0195.t1OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC
Lsat_s020.g0196.t1COILED-COIL DOMAIN-CONTAINING PROTEIN 189
Lsat_s020.g0197.t1DNA REPAIR PROTEIN RAD51 HOMOLOG 3 RAD51C
Lsat_s020.g0198.t1PROTEIN PHOSPHATASE
Lsat_s020.g0199.t1E3 UBIQUITIN-PROTEIN LIGASE TRIM37
Lsat_s020.g0200.t1TRPL TRANSLOCATION DEFECT PROTEIN 14
Lsat_s020.g0201.t1G-PROTEIN COUPLED RECEPTOR
Lsat_s020.g0202.t1KELCH PROTEIN
Lsat_s020.g0203.t1NEPHRIN
Lsat_s020.g0204.t1
Lsat_s020.g0205.t1
Lsat_s020.g0206.t1ACYL-COA DEHYDROGENASE
Lsat_s020.g0207.t1SEMINAL PLASMA PROTEIN
Lsat_s020.g0208.t1WSCD FAMILY MEMBER CG9164
Lsat_s020.g0209.t1TNF RECEPTOR ASSOCIATED FACTOR
Lsat_s020.g0210.t1G-PROTEIN COUPLED RECEPTOR
Lsat_s020.g0211.t1G-PROTEIN COUPLED RECEPTOR
Lsat_s020.g0212.t1
Lsat_s020.g0213.t1
Lsat_s020.g0214.t1HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Lsat_s020.g0215.t1DRAB5-RELATED
Lsat_s020.g0216.t1
Lsat_s020.g0217.t1STERILE ALPHA MOTIF DOMAIN CONTAINING PROTEIN 10
Lsat_s020.g0218.t1
Lsat_s020.g0219.t1
Lsat_s020.g0220.t1X-BOX BINDING PROTEIN 1
Lsat_s020.g0221.t1PROTEIN CBG26694
Lsat_s020.g0222.t1PROTEIN YIPPEE-LIKE CG15309-RELATED
Lsat_s020.g0223.t1RAB GDP/GTP EXCHANGE FACTOR
Lsat_s020.g0224.t1SYNAPTIC VESICLE GLYCOPROTEIN 2
Lsat_s020.g0225.t1
Lsat_s020.g0226.t1SYNAPTIC VESICLE GLYCOPROTEIN 2
Lsat_s020.g0227.t1PROTEIN CBG26694
Lsat_s020.g0228.t1NUCLEOREDOXIN
Lsat_s020.g0229.t1
Lsat_s020.g0230.t1
Lsat_s020.g0231.t1D-DOPACHROME DECARBOXYLASE
Lsat_s020.g0232.t1
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