About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s021.g0323.t1
Lsat_s021.g0324.t1
Lsat_s021.g0325.t1LEUCOKININ RECEPTOR-RELATED
Lsat_s021.g0326.t1
Lsat_s021.g0327.t1
Lsat_s021.g0328.t1
Lsat_s021.g0329.t1LEUCOKININ RECEPTOR-RELATED
Lsat_s021.g0330.t1ECDYSONE-INDUCIBLE GENE E1, ISOFORM A
Lsat_s021.g0331.t1
Lsat_s021.g0332.t1RAS-LIKE FAMILY MEMBER 11
Lsat_s021.g0333.t1
Lsat_s021.g0334.t1
Lsat_s021.g0335.t1
Lsat_s021.g0336.t1
Lsat_s021.g0337.t1CRUMBS FAMILY MEMBER
Lsat_s021.g0338.t1CRUMBS FAMILY MEMBER
Lsat_s021.g0339.t1
Lsat_s021.g0340.t1
Lsat_s021.g0341.t1UNCHARACTERIZED
Lsat_s021.g0342.t1
Lsat_s021.g0343.t1
Lsat_s021.g0344.t1
Lsat_s021.g0345.t1CEREBELLIN-RELATED
Lsat_s021.g0346.t1
Lsat_s021.g0347.t1
Lsat_s021.g0348.t1TRANSCRIPTION COFACTOR VESTIGIAL-LIKE PROTEIN
Lsat_s021.g0349.t1
Lsat_s021.g0350.t1TRANSCRIPTION COFACTOR VESTIGIAL-LIKE PROTEIN
Lsat_s021.g0351.t1
Lsat_s021.g0352.t1SPLICING FACTOR U2AF-ASSOCIATED PROTEIN 2
Lsat_s021.g0353.t1FUKUTIN RELATED PROTEIN
Lsat_s021.g0354.t1GDP-L-FUCOSE SYNTHASE
Lsat_s021.g0355.t1
Lsat_s021.g0356.t1
Lsat_s021.g0357.t1
Lsat_s021.g0358.t1THYMIDINE PHOSPHORYLASE
Lsat_s021.g0359.t1THYMIDINE PHOSPHORYLASE
Lsat_s021.g0360.t1THYMIDINE PHOSPHORYLASE
Lsat_s021.g0361.t1THYMIDINE PHOSPHORYLASE
Lsat_s021.g0362.t1ALDEHYDE DEHYDROGENASE-RELATED
Lsat_s021.g0363.t1UFM1-SPECIFIC PROTEASE 2
Lsat_s021.g0364.t1SERINE PROTEASE INHIBITOR, SERPIN
Lsat_s021.g0365.t1SERINE PROTEASE INHIBITOR, SERPIN
Lsat_s021.g0366.t1SERINE PROTEASE INHIBITOR, SERPIN
Lsat_s021.g0367.t1SERINE PROTEASE INHIBITOR, SERPIN
Lsat_s021.g0368.t1SERINE PROTEASE INHIBITOR, SERPIN
Lsat_s021.g0369.t1RYANODINE RECEPTOR AND IP3 RECEPTOR
Lsat_s021.g0370.t1ACROSIN-RELATED
Lsat_s022.g0001.t1SMC5-SMC6 COMPLEX LOCALIZATION FACTOR 2
Lsat_s022.g0002.t1CARTILAGE INTERMEDIATE LAYER PROTEIN CLIP
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