About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s022.g0103.t1ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Lsat_s022.g0104.t1
Lsat_s022.g0105.t1GABA-B RECEPTOR
Lsat_s022.g0106.t1SOLUTE CARRIER FAMILY 17
Lsat_s022.g0107.t1
Lsat_s022.g0108.t1ANTIGEN KI-67-LIKE PROTEIN
Lsat_s022.g0109.t1INTERLEUKIN-1 RECEPTOR-ASSOCIATED KINASE
Lsat_s022.g0110.t1
Lsat_s022.g0111.t1
Lsat_s022.g0112.t1
Lsat_s022.g0113.t1
Lsat_s022.g0114.t1
Lsat_s022.g0115.t1
Lsat_s022.g0116.t1NEURALIZED
Lsat_s022.g0117.t1NEURALIZED
Lsat_s022.g0118.t1
Lsat_s022.g0119.t1
Lsat_s022.g0120.t1
Lsat_s022.g0121.t1NETRIN/LAMININ-RELATED
Lsat_s022.g0122.t1
Lsat_s022.g0123.t1GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE
Lsat_s022.g0124.t1GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE
Lsat_s022.g0125.t1GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE
Lsat_s022.g0126.t1GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE
Lsat_s022.g0127.t1
Lsat_s022.g0128.t1GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE
Lsat_s022.g0129.t1GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE
Lsat_s022.g0130.t1GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE
Lsat_s022.g0131.t1GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE
Lsat_s022.g0132.t1
Lsat_s022.g0133.t1GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE
Lsat_s022.g0134.t1GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE
Lsat_s022.g0135.t1GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE
Lsat_s022.g0136.t1GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE
Lsat_s022.g0137.t1GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE
Lsat_s022.g0138.t1GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE
Lsat_s022.g0139.t1
Lsat_s022.g0140.t1
Lsat_s022.g0141.t1URACIL-DNA GLYCOSYLASE
Lsat_s022.g0142.t1SWI5-DEPENDENT RECOMBINATION DNA REPAIR PROTEIN 1 HOMOLOG
Lsat_s022.g0143.t1
Lsat_s022.g0144.t1ASPARTATE AMINOTRANSFERASE
Lsat_s022.g0145.t1ASPARTATE AMINOTRANSFERASE
Lsat_s022.g0146.t1PROTEIN CBG17025
Lsat_s022.g0147.t1O-GLCNACASE
Lsat_s022.g0148.t1TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED
Lsat_s022.g0149.t1-
Lsat_s022.g0150.t1HVA22-LIKE PROTEINS
Lsat_s022.g0151.t1
Lsat_s022.g0152.t1
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