About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s022.g0203.t1-
Lsat_s022.g0204.t1
Lsat_s022.g0205.t1ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Lsat_s022.g0206.t1COLLAGEN ALPHA
Lsat_s022.g0207.t1
Lsat_s022.g0208.t1
Lsat_s022.g0209.t1BETA/GAMMA CRYSTALLIN
Lsat_s022.g0210.t1
Lsat_s022.g0211.t1
Lsat_s022.g0212.t1BNIP1-RELATED
Lsat_s022.g0213.t1PROTEIN FAM204A
Lsat_s022.g0214.t1SYNTENIN RELATED
Lsat_s022.g0215.t1
Lsat_s022.g0216.t1SHOOTIN-1
Lsat_s022.g0217.t1ADENOSINE/GUANOSINE DIPHOSPHATASE
Lsat_s022.g0218.t1RIBONUCLEASE P SUBUNIT P30
Lsat_s022.g0219.t1WD40 REPEAT PF20
Lsat_s022.g0220.t1
Lsat_s022.g0221.t1
Lsat_s022.g0222.t1
Lsat_s022.g0223.t1TESTIS DEVELOPMENT PROTEIN PRTD
Lsat_s022.g0224.t1KERATIN ASSOCIATED PROTEIN
Lsat_s022.g0225.t1TESTIS DEVELOPMENT PROTEIN PRTD
Lsat_s022.g0226.t1ANKYRIN REPEAT FAMILY PROTEIN
Lsat_s022.g0227.t1
Lsat_s022.g0228.t1AGAP004327-PA
Lsat_s022.g0229.t1COLLAGEN
Lsat_s022.g0230.t1COLLAGEN ALPHA
Lsat_s022.g0231.t1
Lsat_s022.g0232.t1
Lsat_s022.g0233.t1ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Lsat_s022.g0234.t1
Lsat_s022.g0235.t1
Lsat_s022.g0236.t1PERIAXIN-LIKE
Lsat_s022.g0237.t1RIKEN CDNA D130052B06 GENE
Lsat_s022.g0238.t1
Lsat_s022.g0239.t1
Lsat_s022.g0240.t1
Lsat_s022.g0241.t1ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Lsat_s022.g0242.t1
Lsat_s022.g0243.t1NEUROGENIC PROTEIN MASTERMIND
Lsat_s022.g0244.t1
Lsat_s022.g0245.t1RING ZINC FINGER PROTEIN
Lsat_s022.g0246.t1
Lsat_s022.g0247.t1ADULT RETINA PROTEIN
Lsat_s022.g0248.t1-
Lsat_s022.g0249.t1
Lsat_s022.g0250.t1
Lsat_s022.g0251.t1DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED
Lsat_s022.g0252.t1ALPHA CATENIN
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