About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s023.g0006.t1ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 7
Lsat_s023.g0007.t1
Lsat_s023.g0008.t1
Lsat_s023.g0009.t1SUPRABASAL-SPECIFIC PROTEIN SUPRABASIN
Lsat_s023.g0010.t1PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Lsat_s023.g0011.t1-
Lsat_s023.g0012.t1
Lsat_s023.g0013.t1
Lsat_s023.g0014.t1IG-LIKE DOMAIN-CONTAINING PROTEIN-RELATED
Lsat_s023.g0015.t1GLYCOPROTEIN HORMONE RECEPTOR
Lsat_s023.g0016.t1SLR1441 PROTEIN
Lsat_s023.g0017.t1
Lsat_s023.g0018.t1
Lsat_s023.g0019.t1
Lsat_s023.g0020.t1ACIDIC FIBROBLAST GROWTH FACTOR INTRACELLULAR BINDING PROTEIN
Lsat_s023.g0021.t1
Lsat_s023.g0022.t1CYSTATHIONINE BETA-SYNTHASE
Lsat_s023.g0023.t1
Lsat_s023.g0024.t1CYSTATHIONINE BETA-SYNTHASE
Lsat_s023.g0025.t1
Lsat_s023.g0026.t1ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 7
Lsat_s023.g0027.t1
Lsat_s023.g0028.t1UNCHARACTERIZED
Lsat_s023.g0029.t1
Lsat_s023.g0030.t1
Lsat_s023.g0031.t1
Lsat_s023.g0032.t1PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN
Lsat_s023.g0033.t1
Lsat_s023.g0034.t1
Lsat_s023.g0035.t1TYROSINE-PROTEIN KINASE
Lsat_s023.g0036.t1
Lsat_s023.g0037.t1
Lsat_s023.g0038.t1
Lsat_s023.g0039.t1TESTIS DEVELOPMENT PROTEIN PRTD
Lsat_s023.g0040.t1UDP/ADP-SUGAR PYROPHOSPHATASE
Lsat_s023.g0041.t1UBIQUITIN LIGASE E3 ALPHA-RELATED
Lsat_s023.g0042.t1UBIQUITIN LIGASE E3 ALPHA-RELATED
Lsat_s023.g0043.t1
Lsat_s023.g0044.t1
Lsat_s023.g0045.t1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Lsat_s023.g0046.t1TETRASPANIN
Lsat_s023.g0047.t1PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN
Lsat_s023.g0048.t1PROTEIN CBG17025
Lsat_s023.g0049.t1
Lsat_s023.g0050.t1
Lsat_s023.g0051.t1
Lsat_s023.g0052.t1BLR2807 PROTEIN
Lsat_s023.g0053.t1
Lsat_s023.g0054.t1
Lsat_s023.g0055.t1
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