About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s022.g0053.t1HOMEOBOX PROTEIN NKX
Lsat_s022.g0054.t1
Lsat_s022.g0055.t1
Lsat_s022.g0056.t1
Lsat_s022.g0057.t1SI:CH211-266K2.1
Lsat_s022.g0058.t1
Lsat_s022.g0059.t1GUANYLYL CYCLASE
Lsat_s022.g0060.t1ARM REPEAT SUPERFAMILY PROTEIN
Lsat_s022.g0061.t1ROLLING PEBBLES, ISOFORM B
Lsat_s022.g0062.t1ATP-BINDING CASSETTE SUB-FAMILY C
Lsat_s022.g0063.t1
Lsat_s022.g0064.t1
Lsat_s022.g0065.t1ENDONUCLEASE-RELATED
Lsat_s022.g0066.t1SPONDIN
Lsat_s022.g0067.t1
Lsat_s022.g0068.t1
Lsat_s022.g0069.t1UNCHARACTERIZED
Lsat_s022.g0070.t1CUB DOMAIN-CONTAINING PROTEIN
Lsat_s022.g0071.t1
Lsat_s022.g0072.t1APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.
Lsat_s022.g0073.t1COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
Lsat_s022.g0074.t1
Lsat_s022.g0075.t1
Lsat_s022.g0076.t1
Lsat_s022.g0077.t1COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
Lsat_s022.g0078.t1COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
Lsat_s022.g0079.t1
Lsat_s022.g0080.t1METHYLTRANSFERASE
Lsat_s022.g0081.t1GRPE PROTEIN
Lsat_s022.g0082.t1CILIA AND FLAGELLA-ASSOCIATED PROTEIN 58-RELATED
Lsat_s022.g0083.t1GALACTOSIDE 2-L-FUCOSYLTRANSFERASE
Lsat_s022.g0084.t1AGAP007547-PA
Lsat_s022.g0085.t1
Lsat_s022.g0086.t1RGD1565685 PROTEIN
Lsat_s022.g0087.t1MAINTENANCE OF KILLER 16 MAK16 PROTEIN-RELATED
Lsat_s022.g0088.t1UNCHARACTERIZED
Lsat_s022.g0089.t1LEUCINE-ZIPPER-LIKE TRANSCRIPTIONAL REGULATOR 1
Lsat_s022.g0090.t1NUCLEOLAR COMPLEX PROTEIN 3
Lsat_s022.g0091.t1ZINC FINGER PROTEIN
Lsat_s022.g0092.t1DNA REPAIR/TRANSCRIPTION PROTEIN MET18/MMS19
Lsat_s022.g0093.t1UBIQUITIN DOMAIN CONTAINING 1 PROTEIN-RELATED
Lsat_s022.g0094.t1PROTEIN KINASE DOMAIN-CONTAINING PROTEIN
Lsat_s022.g0095.t1
Lsat_s022.g0096.t1
Lsat_s022.g0097.t1
Lsat_s022.g0098.t1IONOTROPIC RECEPTOR 20A-RELATED
Lsat_s022.g0099.t1
Lsat_s022.g0100.t1
Lsat_s022.g0101.t1IONOTROPIC GLUTAMATE RECEPTOR
Lsat_s022.g0102.t1IONOTROPIC GLUTAMATE RECEPTOR
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