About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s023.g0106.t1
Lsat_s023.g0107.t1
Lsat_s023.g0108.t1
Lsat_s023.g0109.t1
Lsat_s023.g0110.t1
Lsat_s023.g0111.t1BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATED
Lsat_s023.g0112.t1
Lsat_s023.g0113.t1
Lsat_s023.g0114.t1
Lsat_s023.g0115.t1
Lsat_s023.g0116.t1CAMP-DEPENDENT PROTEIN KINASE REGULATORY CHAIN
Lsat_s023.g0117.t1
Lsat_s023.g0118.t1N-ACETYLGALACTOSAMINYLTRANSFERASE
Lsat_s023.g0119.t1
Lsat_s023.g0120.t1PROTEASOME ACTIVATOR COMPLEX SUBUNIT 4
Lsat_s023.g0121.t1HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN
Lsat_s023.g0122.t1ZGC:174356
Lsat_s023.g0123.t1
Lsat_s023.g0124.t1
Lsat_s023.g0125.t1ABSCISSION/NOCUT CHECKPOINT REGULATOR
Lsat_s023.g0126.t1SOX TRANSCRIPTION FACTOR
Lsat_s023.g0127.t1WD-40 REPEAT PROTEIN
Lsat_s023.g0128.t1
Lsat_s023.g0129.t1
Lsat_s023.g0130.t1ADAPTOR COMPLEXES SMALL SUBUNIT FAMILY
Lsat_s023.g0131.t1STRIATIN
Lsat_s023.g0132.t1FUSELESS, ISOFORM A
Lsat_s023.g0133.t1
Lsat_s023.g0134.t1
Lsat_s023.g0135.t1
Lsat_s023.g0136.t1
Lsat_s023.g0137.t1
Lsat_s023.g0138.t1COLLAGEN ALPHA
Lsat_s023.g0139.t1
Lsat_s023.g0140.t1
Lsat_s023.g0141.t1FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED
Lsat_s023.g0142.t1COLLAGEN ALPHA
Lsat_s023.g0143.t1MONOCARBOXYLATE TRANSPORTER
Lsat_s023.g0144.t1COLLAGEN ALPHA
Lsat_s023.g0145.t1
Lsat_s023.g0146.t1COLLAGEN ALPHA
Lsat_s023.g0147.t1MONOCARBOXYLATE TRANSPORTER
Lsat_s023.g0148.t1
Lsat_s023.g0149.t1MONOCARBOXYLATE TRANSPORTER
Lsat_s023.g0150.t1
Lsat_s023.g0151.t1EXPRESSED PROTEIN
Lsat_s023.g0152.t1MONOCARBOXYLATE TRANSPORTER
Lsat_s023.g0153.t1CYSTEINE-RICH PDZ-BINDING PROTEIN
Lsat_s023.g0154.t1RIBONUCLEOPROTEIN RB97D
Lsat_s023.g0155.t1CENTROMERE/KINETOCHORE PROTEIN ZW10
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