About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s025.g0019.t1ACETYLGLUCOSAMINYLTRANSFERASE
Lsat_s025.g0020.t1RAS-RELATED GTP BINDING RAG/GTR YEAST
Lsat_s025.g0021.t1LIPIN
Lsat_s025.g0022.t1BYSTIN
Lsat_s025.g0023.t1
Lsat_s025.g0024.t1CYTOCHROME P450 FAMILY 3
Lsat_s025.g0025.t1
Lsat_s025.g0026.t1
Lsat_s025.g0027.t1
Lsat_s025.g0028.t1
Lsat_s025.g0029.t1
Lsat_s025.g0030.t1
Lsat_s025.g0031.t1
Lsat_s025.g0032.t1
Lsat_s025.g0033.t1ROLLING PEBBLES, ISOFORM B
Lsat_s025.g0034.t1PROTEIN CBG26694
Lsat_s025.g0035.t1
Lsat_s025.g0036.t1
Lsat_s025.g0037.t1
Lsat_s025.g0038.t1VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-RELATED
Lsat_s025.g0039.t1VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-RELATED
Lsat_s025.g0040.t1NOTCH LIGAND FAMILY MEMBER
Lsat_s025.g0041.t1
Lsat_s025.g0042.t1VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-RELATED
Lsat_s025.g0043.t1NOTCH LIGAND FAMILY MEMBER
Lsat_s025.g0044.t1VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-RELATED
Lsat_s025.g0045.t1CRUMBS FAMILY MEMBER
Lsat_s025.g0046.t1CRUMBS FAMILY MEMBER
Lsat_s025.g0047.t1PAPILLOMAVIRUS REGULATORY FACTOR PRF-1
Lsat_s025.g0048.t1
Lsat_s025.g0049.t1TRANSPORTER
Lsat_s025.g0050.t1
Lsat_s025.g0051.t1
Lsat_s025.g0052.t1
Lsat_s025.g0053.t1
Lsat_s025.g0054.t1
Lsat_s025.g0055.t1
Lsat_s025.g0056.t1
Lsat_s025.g0057.t1
Lsat_s025.g0058.t1
Lsat_s025.g0059.t1CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2
Lsat_s025.g0060.t1
Lsat_s025.g0061.t1
Lsat_s025.g0062.t1
Lsat_s025.g0063.t1
Lsat_s025.g0064.t1
Lsat_s025.g0065.t1
Lsat_s025.g0066.t1SLIT HOMOLOG
Lsat_s025.g0067.t1
Lsat_s025.g0068.t1UNCHARACTERIZED
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