About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s025.g0119.t1PROTEIN KINASE C-BINDING PROTEIN 1
Lsat_s025.g0120.t1TRANSLOCATION ASSOCIATED MEMBRANE PROTEIN
Lsat_s025.g0121.t1PH DOMAIN-CONTAINING PROTEIN
Lsat_s025.g0122.t1
Lsat_s025.g0123.t1GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE
Lsat_s025.g0124.t1DESTABILASE-RELATED
Lsat_s025.g0125.t1DESTABILASE-RELATED
Lsat_s025.g0126.t1
Lsat_s025.g0127.t1DESTABILASE-RELATED
Lsat_s025.g0128.t1
Lsat_s025.g0129.t1GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE
Lsat_s025.g0130.t1
Lsat_s025.g0131.t1LEISHMANOLYSIN-LIKE PEPTIDASE
Lsat_s025.g0132.t1DESTABILASE-RELATED
Lsat_s025.g0133.t1DESTABILASE-RELATED
Lsat_s025.g0134.t1
Lsat_s025.g0135.t1
Lsat_s025.g0136.t1FMRFAMIDE RECEPTOR-RELATED
Lsat_s025.g0137.t1CXC DOMAIN-CONTAINING PROTEIN-RELATED
Lsat_s025.g0138.t1C-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 180
Lsat_s025.g0139.t1
Lsat_s025.g0140.t1ACROSIN-RELATED
Lsat_s025.g0141.t1BONUS, ISOFORM C-RELATED
Lsat_s025.g0142.t1-
Lsat_s025.g0143.t1VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-RELATED
Lsat_s025.g0144.t1VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-RELATED
Lsat_s025.g0145.t1
Lsat_s025.g0146.t1ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Lsat_s025.g0147.t1VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 13B
Lsat_s025.g0148.t1RETINOBLASTOMA BINDING PROTEIN 8
Lsat_s025.g0149.t1
Lsat_s025.g0150.t1
Lsat_s025.g0151.t1
Lsat_s025.g0152.t1B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR
Lsat_s025.g0153.t1THYLAKOID LUMENAL 17.4 KDA PROTEIN, CHLOROPLASTIC
Lsat_s025.g0154.t1THYLAKOID LUMENAL 17.4 KDA PROTEIN, CHLOROPLASTIC
Lsat_s025.g0155.t1THYLAKOID LUMENAL 17.4 KDA PROTEIN, CHLOROPLASTIC
Lsat_s025.g0156.t1HISTIDINE-RICH GLYCOPROTEIN
Lsat_s025.g0157.t1HISTIDINE-RICH GLYCOPROTEIN
Lsat_s025.g0158.t1PLAT DOMAIN-CONTAINING PROTEIN
Lsat_s025.g0159.t1MUCIN-22
Lsat_s025.g0160.t1DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
Lsat_s025.g0161.t1
Lsat_s025.g0162.t1MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATED
Lsat_s025.g0163.t1ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 7
Lsat_s025.g0164.t1GRB2-ASSOCIATED AND REGULATOR OF MAPK PROTEIN FAMILY MEMBER
Lsat_s025.g0165.t1AGAP001705-PA
Lsat_s025.g0166.t1AGAP001705-PA
Lsat_s025.g0167.t1
Lsat_s025.g0168.t1BONUS, ISOFORM C-RELATED
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