About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s025.g0219.t1PALMITOYLTRANSFERASE ZDHHC16
Lsat_s025.g0220.t1
Lsat_s025.g0221.t1ARCHEASE
Lsat_s025.g0222.t1DESTABILASE-RELATED
Lsat_s025.g0223.t1DESTABILASE-RELATED
Lsat_s025.g0224.t1
Lsat_s025.g0225.t1EF-HAND DOMAIN C-TERMINAL CONTAINING PROTEIN
Lsat_s025.g0226.t1SYNTROPHIN
Lsat_s025.g0227.t1NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED
Lsat_s025.g0228.t1
Lsat_s025.g0229.t1CYTOKINE RECEPTOR
Lsat_s025.g0230.t1
Lsat_s025.g0231.t1
Lsat_s025.g0232.t1VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-RELATED
Lsat_s025.g0233.t1HEAT SHOCK PROTEIN 70KDA
Lsat_s025.g0234.t1HEAT SHOCK PROTEIN 70KDA
Lsat_s025.g0235.t1
Lsat_s025.g0236.t1
Lsat_s025.g0237.t1
Lsat_s025.g0238.t1MIDASIN-RELATED
Lsat_s025.g0239.t1
Lsat_s025.g0240.t1HOMEO BOX HB9 LIKE A-RELATED
Lsat_s025.g0241.t1X-BOX BINDING PROTEIN 1
Lsat_s025.g0242.t1(E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME
Lsat_s025.g0243.t1GLYCEROL-3-PHOSPHATE DEHYDROGENASE
Lsat_s025.g0244.t1SKICH DOMAIN-CONTAINING PROTEIN
Lsat_s025.g0245.t13-HYDROXYISOBUTYRATE DEHYDROGENASE-RELATED
Lsat_s025.g0246.t1PA14 DOMAIN-CONTAINING PROTEIN
Lsat_s025.g0247.t1
Lsat_s025.g0248.t1SOLUTE CARRIER FAMILY 39
Lsat_s025.g0249.t1ZINC FINGER PROTEIN
Lsat_s025.g0250.t1METALLO-BETA-LACTAMASE DOMAIN-CONTAINING
Lsat_s025.g0251.t1COILED-COIL DOMAIN-CONTAINING PROTEIN 13
Lsat_s025.g0252.t1ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE
Lsat_s025.g0253.t1BETA-1,4-GALACTOSYLTRANSFERASE
Lsat_s025.g0254.t1
Lsat_s025.g0255.t1UNCHARACTERIZED
Lsat_s025.g0256.t1
Lsat_s025.g0257.t1CLASP
Lsat_s025.g0258.t1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Lsat_s025.g0259.t1EGF-LIKE DOMAIN-CONTAINING PROTEIN
Lsat_s025.g0260.t1CRUMBS FAMILY MEMBER
Lsat_s025.g0261.t1NOTCH LIGAND FAMILY MEMBER
Lsat_s025.g0262.t1
Lsat_s025.g0263.t1CRUMBS FAMILY MEMBER
Lsat_s025.g0264.t1STI2 PROTEIN-RELATED
Lsat_s025.g0265.t1
Lsat_s025.g0266.t1
Lsat_s025.g0267.t1
Lsat_s025.g0268.t1SERINE/THREONINE-PROTEIN KINASE FRAY2
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