About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s025.g0369.t1
Lsat_s025.g0370.t1
Lsat_s025.g0371.t1
Lsat_s025.g0372.t1GTPASE, IMAP FAMILY MEMBER-RELATED
Lsat_s025.g0373.t1
Lsat_s025.g0374.t1
Lsat_s025.g0375.t1WD40 REPEAT PROTEIN
Lsat_s025.g0376.t1
Lsat_s025.g0377.t1
Lsat_s025.g0378.t1WD REPEAT-CONTAINING PROTEIN 48
Lsat_s025.g0379.t114-3-3 PROTEIN
Lsat_s025.g0380.t1MRNA TURNOVER PROTEIN 4 MRTO4
Lsat_s025.g0381.t1PIKACHURIN-LIKE PROTEIN
Lsat_s025.g0382.t1
Lsat_s025.g0383.t1NOTCH LIGAND FAMILY MEMBER
Lsat_s025.g0384.t1
Lsat_s025.g0385.t1
Lsat_s025.g0386.t1NEUROLIGIN
Lsat_s025.g0387.t1ZEIN-ALPHA A20-RELATED
Lsat_s025.g0388.t1
Lsat_s025.g0389.t1
Lsat_s025.g0390.t1
Lsat_s025.g0391.t1POLYCYSTIN FAMILY MEMBER
Lsat_s025.g0392.t1
Lsat_s025.g0393.t1
Lsat_s025.g0394.t1
Lsat_s025.g0395.t1FIBRILLIN-RELATED
Lsat_s025.g0396.t1
Lsat_s025.g0397.t1
Lsat_s025.g0398.t1
Lsat_s025.g0399.t1FIBRILLIN-RELATED
Lsat_s025.g0400.t1FMRFAMIDE RECEPTOR-RELATED
Lsat_s025.g0401.t1-
Lsat_s025.g0402.t1
Lsat_s026.g0001.t1CHITINASE
Lsat_s026.g0002.t1CHITINASE
Lsat_s026.g0003.t1CHITINASE
Lsat_s026.g0004.t1CHITINASE
Lsat_s026.g0005.t1CHITINASE
Lsat_s026.g0006.t1
Lsat_s026.g0007.t1
Lsat_s026.g0008.t1MAMMALIAN EPENDYMIN-RELATED PROTEIN 1
Lsat_s026.g0009.t1
Lsat_s026.g0010.t1
Lsat_s026.g0011.t1
Lsat_s026.g0012.t1NEPHRIN
Lsat_s026.g0013.t1MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM22
Lsat_s026.g0014.t1ATAXIA TELANGIECTASIA MUTATED ATM -RELATED
Lsat_s026.g0015.t1
Lsat_s026.g0016.t1
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