About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s025.g0269.t1COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
Lsat_s025.g0270.t1
Lsat_s025.g0271.t1COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
Lsat_s025.g0272.t1NISCHARIN RELATED
Lsat_s025.g0273.t1
Lsat_s025.g0274.t1EGF-LIKE DOMAIN-CONTAINING PROTEIN
Lsat_s025.g0275.t1
Lsat_s025.g0276.t1
Lsat_s025.g0277.t1GLUTAMATE CYSTEINE LIGASE
Lsat_s025.g0278.t1
Lsat_s025.g0279.t1UNCHARACTERIZED
Lsat_s025.g0280.t1COLLAGEN ALPHA
Lsat_s025.g0281.t1
Lsat_s025.g0282.t1
Lsat_s025.g0283.t1
Lsat_s025.g0284.t160S RIBOSOMAL PROTEIN L11-RELATED
Lsat_s025.g0285.t1NYD-SP28 PROTEIN
Lsat_s025.g0286.t1
Lsat_s025.g0287.t1OPSIN
Lsat_s025.g0288.t1APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.
Lsat_s025.g0289.t1
Lsat_s025.g0290.t1
Lsat_s025.g0291.t1
Lsat_s025.g0292.t1
Lsat_s025.g0293.t1
Lsat_s025.g0294.t1
Lsat_s025.g0295.t1
Lsat_s025.g0296.t1
Lsat_s025.g0297.t1
Lsat_s025.g0298.t1
Lsat_s025.g0299.t1
Lsat_s025.g0300.t1
Lsat_s025.g0301.t1MOLTING PROTEIN MLT-4
Lsat_s025.g0302.t1TRYPTASE-RELATED
Lsat_s025.g0303.t1NPC INTRACELLULAR CHOLESTEROL TRANSPORTER 1
Lsat_s025.g0304.t1PROTEIN DISULFIDE-ISOMERASE A6
Lsat_s025.g0305.t1INTEGRATOR COMPLEX SUBUNIT 9
Lsat_s025.g0306.t1
Lsat_s025.g0307.t1CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2
Lsat_s025.g0308.t1EGF-LIKE DOMAIN-CONTAINING PROTEIN
Lsat_s025.g0309.t1NOTCH LIGAND FAMILY MEMBER
Lsat_s025.g0310.t1
Lsat_s025.g0311.t1SMALL PROLINE-RICH PROTEIN
Lsat_s025.g0312.t1TRANSFORMING ACIDIC COILED-COIL CONTAINING PROTEIN 1/2
Lsat_s025.g0313.t1
Lsat_s025.g0314.t1
Lsat_s025.g0315.t1UNCHARACTERIZED
Lsat_s025.g0316.t1WD40 REPEAT PROTEIN 12, 37
Lsat_s025.g0317.t1
Lsat_s025.g0318.t1RING BOX
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