Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
| Gene ID | Description |
|---|---|
| Lsat_s026.g0167.t1 | |
| Lsat_s026.g0168.t1 | NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL-RELATED |
| Lsat_s026.g0169.t1 | DNAJ HOMOLOG SUBFAMILY C MEMBER 12 |
| Lsat_s026.g0170.t1 | |
| Lsat_s026.g0171.t1 | GLUTATHIONE S-TRANSFERASE |
| Lsat_s026.g0172.t1 | |
| Lsat_s026.g0173.t1 | OLIGORIBONUCLEASE, MITOCHONDRIAL |
| Lsat_s026.g0174.t1 | UNCHARACTERIZED |
| Lsat_s026.g0175.t1 | UNCHARACTERIZED |
| Lsat_s026.g0176.t1 | |
| Lsat_s026.g0177.t1 | |
| Lsat_s026.g0178.t1 | |
| Lsat_s026.g0179.t1 | MYOSIN LIGHT CHAIN 1, 3 |
| Lsat_s026.g0180.t1 | VOLTAGE-DEPENDENT CALCIUM CHANNEL GAMMA SUBUNIT |
| Lsat_s026.g0181.t1 | GLYCOPROTEIN HORMONE RECEPTOR |
| Lsat_s026.g0182.t1 | LEUCINE RICH REPEAT FAMILY PROTEIN |
| Lsat_s026.g0183.t1 | GLYCOPROTEIN HORMONE RECEPTOR |
| Lsat_s026.g0184.t1 | |
| Lsat_s026.g0185.t1 | |
| Lsat_s026.g0186.t1 | |
| Lsat_s026.g0187.t1 | MULTIDRUG RESISTANCE PROTEIN |
| Lsat_s026.g0188.t1 | |
| Lsat_s026.g0189.t1 | MULTIDRUG RESISTANCE PROTEIN |
| Lsat_s026.g0190.t1 | G-PROTEIN COUPLED RECEPTOR |
| Lsat_s026.g0191.t1 | FMRFAMIDE RECEPTOR-RELATED |
| Lsat_s026.g0192.t1 | |
| Lsat_s026.g0193.t1 | FMRFAMIDE RECEPTOR-RELATED |
| Lsat_s026.g0194.t1 | SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER |
| Lsat_s026.g0195.t1 | HAUS AUGMIN-LIKE COMPLEX SUBUNIT 2 |
| Lsat_s026.g0196.t1 | IONOTROPIC GLUTAMATE RECEPTOR |
| Lsat_s026.g0197.t1 | |
| Lsat_s026.g0198.t1 | |
| Lsat_s026.g0199.t1 | |
| Lsat_s026.g0200.t1 | THIOREDOXIN DOMAIN-CONTAINING PROTEIN 11 |
| Lsat_s026.g0201.t1 | CHITINASE |
| Lsat_s026.g0202.t1 | MITOGEN-ACTIVATED PROTEIN KINASE |
| Lsat_s026.g0203.t1 | AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C |
| Lsat_s026.g0204.t1 | |
| Lsat_s026.g0205.t1 | FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED |
| Lsat_s026.g0206.t1 | REGULATOR OF CHROMOSOME CONDENSATION |
| Lsat_s026.g0207.t1 | WW DOMAIN BINDING PROTEIN 2, ISOFORM E |
| Lsat_s026.g0208.t1 | BCL2 INTERACTING MEDIATOR OF CELL DEATH |
| Lsat_s026.g0209.t1 | MYOSIN HEAVY CHAIN, NON-MUSCLE |
| Lsat_s026.g0210.t1 | |
| Lsat_s026.g0211.t1 | ATP-DEPENDENT RNA HELICASE RHLE-RELATED |
| Lsat_s026.g0212.t1 | STEROID 17-ALPHA-HYDROXYLASE/17,20 LYASE |
| Lsat_s026.g0213.t1 | STEROID 17-ALPHA-HYDROXYLASE/17,20 LYASE |
| Lsat_s026.g0214.t1 | STEROID 17-ALPHA-HYDROXYLASE/17,20 LYASE |
| Lsat_s026.g0215.t1 | |
| Lsat_s026.g0216.t1 | STEROID 17-ALPHA-HYDROXYLASE/17,20 LYASE |
