About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s026.g0267.t1
Lsat_s026.g0268.t1SODIUM/CHLORIDE DEPENDENT TRANSPORTER
Lsat_s026.g0269.t1CRUMBS FAMILY MEMBER
Lsat_s026.g0270.t1
Lsat_s026.g0271.t1
Lsat_s026.g0272.t1DNA POLYMERASE DELTA SUBUNIT 2
Lsat_s026.g0273.t1
Lsat_s026.g0274.t1
Lsat_s026.g0275.t1
Lsat_s026.g0276.t1
Lsat_s026.g0277.t1
Lsat_s026.g0278.t1
Lsat_s026.g0279.t1BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATED
Lsat_s026.g0280.t1
Lsat_s026.g0281.t1SODIUM/CHLORIDE DEPENDENT TRANSPORTER
Lsat_s026.g0282.t1
Lsat_s026.g0283.t1
Lsat_s026.g0284.t1SI:CH211-266K2.1
Lsat_s026.g0285.t1COLLAGEN ALPHA
Lsat_s026.g0286.t1
Lsat_s026.g0287.t1
Lsat_s026.g0288.t1
Lsat_s026.g0289.t1COLLAGEN ALPHA
Lsat_s026.g0290.t1PROTEIN CBG12054-RELATED
Lsat_s026.g0291.t1COLLAGEN ALPHA
Lsat_s026.g0292.t1COLLAGEN
Lsat_s026.g0293.t1COLLAGEN
Lsat_s026.g0294.t1UPF0764 PROTEIN C16ORF89
Lsat_s026.g0295.t1MONOCARBOXYLATE TRANSPORTER
Lsat_s026.g0296.t1O-ACYLTRANSFERASE (WSD1-LIKE) FAMILY PROTEIN
Lsat_s026.g0297.t1ALPHA-GLUCOSIDASE
Lsat_s026.g0298.t1
Lsat_s026.g0299.t1G-PROTEIN COUPLED RECEPTOR
Lsat_s026.g0300.t1SLEI FAMILY PROTEIN
Lsat_s026.g0301.t1LEUCOKININ RECEPTOR-RELATED
Lsat_s026.g0302.t1
Lsat_s026.g0303.t1
Lsat_s026.g0304.t1UBIQUITINATION FACTOR E4
Lsat_s026.g0305.t1
Lsat_s026.g0306.t1UBIQUITINATION FACTOR E4
Lsat_s026.g0307.t1AMINOACYL TRNA SYNTHASE COMPLEX-INTERACTING MULTIFUNCTIONAL PROTEIN
Lsat_s026.g0308.t1-
Lsat_s026.g0309.t1TRANSIENT RECEPTOR POTENTIAL CHANNEL
Lsat_s026.g0310.t1
Lsat_s026.g0311.t1COLLAGEN IV NC1 DOMAIN-CONTAINING PROTEIN
Lsat_s026.g0312.t1
Lsat_s026.g0313.t1HECT DOMAIN UBIQUITIN-PROTEIN LIGASE
Lsat_s026.g0314.t1
Lsat_s026.g0315.t1GLUTAMATE-RICH WD REPEAT-CONTAINING PROTEIN 1
Lsat_s026.g0316.t1ACTIVATING TRANSCRIPTION FACTOR 7 INTERACTING PROTEIN
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