About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s027.g0095.t1GH04784P
Lsat_s027.g0096.t1TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 11-RELATED
Lsat_s027.g0097.t1SERINE/THREONINE-PROTEIN KINASE
Lsat_s027.g0098.t1F-BOX ONLY PROTEIN 47
Lsat_s027.g0099.t1PAX6 NEIGHBOR PROTEIN PAXNEB
Lsat_s027.g0100.t1TRANSCRIPTIONAL REPRESSOR PROTEIN YY
Lsat_s027.g0101.t1RETICULOCALBIN
Lsat_s027.g0102.t1BAP28
Lsat_s027.g0103.t1
Lsat_s027.g0104.t1
Lsat_s027.g0105.t1
Lsat_s027.g0106.t1PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_5G03330)-RELATED
Lsat_s027.g0107.t1METAL DEPENDENT HYDROLASE - RELATED
Lsat_s027.g0108.t1
Lsat_s027.g0109.t1METAL DEPENDENT HYDROLASE - RELATED
Lsat_s027.g0110.t1L-GULONOLACTONE OXIDASE
Lsat_s027.g0111.t1L-GULONOLACTONE OXIDASE
Lsat_s027.g0112.t1
Lsat_s027.g0113.t1L-GULONOLACTONE OXIDASE
Lsat_s027.g0114.t1L-GULONOLACTONE OXIDASE
Lsat_s027.g0115.t1L-GULONOLACTONE OXIDASE
Lsat_s027.g0116.t1
Lsat_s027.g0117.t1
Lsat_s027.g0118.t1PERIAXIN-LIKE
Lsat_s027.g0119.t1PERIAXIN-LIKE
Lsat_s027.g0120.t1FRIZZLED
Lsat_s027.g0121.t1
Lsat_s027.g0122.t1
Lsat_s027.g0123.t1SERINE/THREONINE PROTEIN KINASE
Lsat_s027.g0124.t140S RIBOSOMAL PROTEIN S11 FAMILY MEMBER
Lsat_s027.g0125.t1
Lsat_s027.g0126.t1IP22168P
Lsat_s027.g0127.t1DYNEIN ASSEMBLY FACTOR 3, AXONEMAL
Lsat_s027.g0128.t1CWF19, CELL CYCLE CONTROL PROTEIN
Lsat_s027.g0129.t1TRANSCRIPTION INITIATION FACTOR TFIID
Lsat_s027.g0130.t1SERINE/THREONINE-PROTEIN KINASE
Lsat_s027.g0131.t1OVARIAN CARCINOMA ANTIGEN CA125-RELATED
Lsat_s027.g0132.t1INTRACELLULAR TRAFFIC PROTEIN-RELATED
Lsat_s027.g0133.t1ZINC FINGER PROTEIN
Lsat_s027.g0134.t1
Lsat_s027.g0135.t1UBIQUITIN-CONJUGATING ENZYME E2
Lsat_s027.g0136.t1PHOSPHATIDYLINOSITOL SYNTHASE
Lsat_s027.g0137.t1
Lsat_s027.g0138.t1FMRFAMIDE-RELATED PEPTIDES
Lsat_s027.g0139.t1UNCHARACTERIZED
Lsat_s027.g0140.t1
Lsat_s027.g0141.t1
Lsat_s027.g0142.t1T-SNARE COILED-COIL HOMOLOGY DOMAIN-CONTAINING PROTEIN
Lsat_s027.g0143.t1GENE 9195-RELATED-RELATED
Lsat_s027.g0144.t1
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