About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s027.g0195.t1ARYLSULFATASE
Lsat_s027.g0196.t1POLY [ADP-RIBOSE] POLYMERASE
Lsat_s027.g0197.t1TRANSCRIPTIONAL REPRESSOR CTCFL-RELATED
Lsat_s027.g0198.t1MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 25
Lsat_s027.g0199.t1
Lsat_s027.g0200.t1SKP1
Lsat_s027.g0201.t1
Lsat_s027.g0202.t1
Lsat_s027.g0203.t1
Lsat_s027.g0204.t1AGAP008648-PA
Lsat_s027.g0205.t1AGAP008648-PA
Lsat_s027.g0206.t1
Lsat_s027.g0207.t1SODIUM/CHLORIDE DEPENDENT TRANSPORTER
Lsat_s027.g0208.t137S RIBOSOMAL PROTEIN S26, MITOCHONDRIAL
Lsat_s027.g0209.t1
Lsat_s027.g0210.t1
Lsat_s027.g0211.t1ARMADILLO REPEAT-CONTAINING PROTEIN 8
Lsat_s027.g0212.t1RNA LARIAT DEBRANCHING ENZYME
Lsat_s027.g0213.t1HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED
Lsat_s027.g0214.t1
Lsat_s027.g0215.t1CARBOHYDRATE SULFOTRANSFERASE
Lsat_s027.g0216.t1TYROSINE-PROTEIN KINASE RECEPTOR
Lsat_s027.g0217.t1
Lsat_s027.g0218.t1
Lsat_s027.g0219.t1
Lsat_s027.g0220.t1NUCLEOTIDE-SUGAR TRANSMEMBRANE TRANSPORTER
Lsat_s027.g0221.t1UNCHARACTERIZED
Lsat_s027.g0222.t1G-PROTEIN COUPLED RECEPTOR
Lsat_s027.g0223.t1
Lsat_s027.g0224.t137S RIBOSOMAL PROTEIN S26, MITOCHONDRIAL
Lsat_s027.g0225.t137S RIBOSOMAL PROTEIN S26, MITOCHONDRIAL
Lsat_s027.g0226.t1
Lsat_s027.g0227.t137S RIBOSOMAL PROTEIN S26, MITOCHONDRIAL
Lsat_s027.g0228.t1NADH-UBIQUINONE OXIDOREDUCTASE 13 KD-A SUBUNIT
Lsat_s027.g0229.t1
Lsat_s027.g0230.t1SET DOMAIN-CONTAINING PROTEIN-RELATED
Lsat_s027.g0231.t1UNCHARACTERIZED
Lsat_s027.g0232.t1WNT RELATED
Lsat_s027.g0233.t1WNT RELATED
Lsat_s027.g0234.t1
Lsat_s027.g0235.t1
Lsat_s027.g0236.t1WNT RELATED
Lsat_s027.g0237.t1
Lsat_s027.g0238.t1-
Lsat_s027.g0239.t1
Lsat_s027.g0240.t1
Lsat_s027.g0241.t1
Lsat_s027.g0242.t1
Lsat_s027.g0243.t1
Lsat_s027.g0244.t1WNT RELATED
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