Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
| Gene ID | Description |
|---|---|
| Lsat_s027.g0045.t1 | MAP KINASE KINASE KINASE SSK2-RELATED-RELATED |
| Lsat_s027.g0046.t1 | LUPUS LA PROTEIN-RELATED |
| Lsat_s027.g0047.t1 | PROHIBITIN |
| Lsat_s027.g0048.t1 | |
| Lsat_s027.g0049.t1 | |
| Lsat_s027.g0050.t1 | N-ACETYLGALACTOSAMINYLTRANSFERASE |
| Lsat_s027.g0051.t1 | N-ACETYLGALACTOSAMINYLTRANSFERASE |
| Lsat_s027.g0052.t1 | |
| Lsat_s027.g0053.t1 | NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58 |
| Lsat_s027.g0054.t1 | AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED |
| Lsat_s027.g0055.t1 | AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED |
| Lsat_s027.g0056.t1 | BLR7054 PROTEIN |
| Lsat_s027.g0057.t1 | DNA HELICASE RECQ FAMILY MEMBER |
| Lsat_s027.g0058.t1 | GLYCOSYLTRANSFERASE |
| Lsat_s027.g0059.t1 | GLYCOSYLTRANSFERASE-RELATED |
| Lsat_s027.g0060.t1 | SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS |
| Lsat_s027.g0061.t1 | EPM2A-INTERACTING PROTEIN 1 |
| Lsat_s027.g0062.t1 | |
| Lsat_s027.g0063.t1 | PROTEIN SIDEKICK |
| Lsat_s027.g0064.t1 | EGF-LIKE-DOMAIN, MULTIPLE 7, 8 |
| Lsat_s027.g0065.t1 | UNCHARACTERIZED |
| Lsat_s027.g0066.t1 | |
| Lsat_s027.g0067.t1 | |
| Lsat_s027.g0068.t1 | |
| Lsat_s027.g0069.t1 | |
| Lsat_s027.g0070.t1 | CAMK FAMILY PROTEIN KINASE |
| Lsat_s027.g0071.t1 | CAMK FAMILY PROTEIN KINASE |
| Lsat_s027.g0072.t1 | WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED |
| Lsat_s027.g0073.t1 | |
| Lsat_s027.g0074.t1 | UNCHARACTERIZED |
| Lsat_s027.g0075.t1 | LAR INTERACTING PROTEIN LIP -RELATED PROTEIN |
| Lsat_s027.g0076.t1 | DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER |
| Lsat_s027.g0077.t1 | CGI-141-RELATED/LIPASE CONTAINING PROTEIN |
| Lsat_s027.g0078.t1 | |
| Lsat_s027.g0079.t1 | |
| Lsat_s027.g0080.t1 | |
| Lsat_s027.g0081.t1 | |
| Lsat_s027.g0082.t1 | |
| Lsat_s027.g0083.t1 | |
| Lsat_s027.g0084.t1 | |
| Lsat_s027.g0085.t1 | TRANSCRIPTION ACTIVATOR MSS11 |
| Lsat_s027.g0086.t1 | |
| Lsat_s027.g0087.t1 | |
| Lsat_s027.g0088.t1 | |
| Lsat_s027.g0089.t1 | |
| Lsat_s027.g0090.t1 | PAIRED BOX PROTEIN PAX-6-RELATED-RELATED |
| Lsat_s027.g0091.t1 | |
| Lsat_s027.g0092.t1 | |
| Lsat_s027.g0093.t1 | |
| Lsat_s027.g0094.t1 | ANKYRIN REPEAT AND STERILE ALPHA MOTIF DOMAIN-CONTAINING PROTEIN 1 |
