About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s027.g0145.t1TRANSMEMBRANE PROTEIN 237
Lsat_s027.g0146.t1TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
Lsat_s027.g0147.t1TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
Lsat_s027.g0148.t1UNCHARACTERIZED
Lsat_s027.g0149.t1PROTEIN CBG16327
Lsat_s027.g0150.t1MYOTUBULARIN-RELATED
Lsat_s027.g0151.t1BCL-2 RELATED
Lsat_s027.g0152.t1
Lsat_s027.g0153.t1SOLUTE CARRIER FAMILY 17
Lsat_s027.g0154.t1
Lsat_s027.g0155.t1
Lsat_s027.g0156.t1SI:CH211-266K2.1
Lsat_s027.g0157.t1
Lsat_s027.g0158.t1COLLAGEN ALPHA
Lsat_s027.g0159.t1SI:CH211-266K2.1
Lsat_s027.g0160.t1SI:CH211-266K2.1
Lsat_s027.g0161.t1
Lsat_s027.g0162.t1SI:CH211-266K2.1
Lsat_s027.g0163.t1BLR2807 PROTEIN
Lsat_s027.g0164.t1RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR B
Lsat_s027.g0165.t1NURIM
Lsat_s027.g0166.t1GUANYLYL CYCLASE
Lsat_s027.g0167.t1
Lsat_s027.g0168.t1GUANYLYL CYCLASE
Lsat_s027.g0169.t1COILED-COIL DOMAIN-CONTAINING PROTEIN 91
Lsat_s027.g0170.t1MALE STERILITY PROTEIN 2-RELATED
Lsat_s027.g0171.t1MALE STERILITY PROTEIN 2-RELATED
Lsat_s027.g0172.t1
Lsat_s027.g0173.t1RIBOSOMAL PROTEIN S15P/S13E
Lsat_s027.g0174.t1RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILY
Lsat_s027.g0175.t1ALDEHYDE DEHYDROGENASE
Lsat_s027.g0176.t1MYB PROTEIN-RELATED
Lsat_s027.g0177.t1
Lsat_s027.g0178.t1FARNESYL-PYROPHOSPHATE SYNTHETASE
Lsat_s027.g0179.t1TRANSCRIPTIONAL REPRESSOR CTCFL-RELATED
Lsat_s027.g0180.t1
Lsat_s027.g0181.t1
Lsat_s027.g0182.t1
Lsat_s027.g0183.t1
Lsat_s027.g0184.t1GDNF RECEPTOR ALPHA
Lsat_s027.g0185.t1ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD
Lsat_s027.g0186.t1SODIUM/CHLORIDE DEPENDENT TRANSPORTER
Lsat_s027.g0187.t1COLLAGEN ALPHA
Lsat_s027.g0188.t1COLLAGEN
Lsat_s027.g0189.t1
Lsat_s027.g0190.t1
Lsat_s027.g0191.t1
Lsat_s027.g0192.t1
Lsat_s027.g0193.t1
Lsat_s027.g0194.t1DNA POLYMERASE CATALYTIC SUBUNIT
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