About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s028.g0041.t1BONUS, ISOFORM C-RELATED
Lsat_s028.g0042.t1
Lsat_s028.g0043.t1BIFUNCTIONAL DTTP/UTP PYROPHOSPHATASE/METHYLTRANSFERASE PROTEIN-RELATED
Lsat_s028.g0044.t1PROTEIN ABHD18
Lsat_s028.g0045.t1PROTEIN ABHD18
Lsat_s028.g0046.t1NUCLEOPORIN P58/P45 NUCLEOPORIN-LIKE PROTEIN 1
Lsat_s028.g0047.t1
Lsat_s028.g0048.t1
Lsat_s028.g0049.t1MYOTUBULARIN-RELATED
Lsat_s028.g0050.t1ANKYRIN REPEAT FAMILY PROTEIN
Lsat_s028.g0051.t1SORTING NEXIN
Lsat_s028.g0052.t1
Lsat_s028.g0053.t1
Lsat_s028.g0054.t1
Lsat_s028.g0055.t1
Lsat_s028.g0056.t1SOLUTE CARRIER FAMILY 13 MEMBER
Lsat_s028.g0057.t1
Lsat_s028.g0058.t1DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
Lsat_s028.g0059.t1ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED
Lsat_s028.g0060.t1UNCHARACTERIZED
Lsat_s028.g0061.t1ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100
Lsat_s028.g0062.t1DEATH EFFECTOR DOMAIN-CONTAINING PROTEIN
Lsat_s028.g0063.t1UNCHARACTERIZED
Lsat_s028.g0064.t1FGF RECEPTOR ACTIVATING PROTEIN 1
Lsat_s028.g0065.t1
Lsat_s028.g0066.t1
Lsat_s028.g0067.t1
Lsat_s028.g0068.t1
Lsat_s028.g0069.t1
Lsat_s028.g0070.t1
Lsat_s028.g0071.t1DYNEIN HEAVY CHAIN
Lsat_s028.g0072.t1ZINC FINGER PROTEIN
Lsat_s028.g0073.t1
Lsat_s028.g0074.t1ZINC FINGER PROTEIN
Lsat_s028.g0075.t1TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
Lsat_s028.g0076.t1UNCHARACTERIZED
Lsat_s028.g0077.t1TYROSINE-PROTEIN KINASE RECEPTOR
Lsat_s028.g0078.t1PROTEIN CBG17025
Lsat_s028.g0079.t1TYROSINE-PROTEIN KINASE RECEPTOR
Lsat_s028.g0080.t1TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
Lsat_s028.g0081.t1
Lsat_s028.g0082.t1PROTEIN DIAPHANOUS
Lsat_s028.g0083.t1
Lsat_s028.g0084.t1CYCLIC NUCLEOTIDE-GATED CATION CHANNEL SUBUNIT A
Lsat_s028.g0085.t1TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
Lsat_s028.g0086.t1
Lsat_s028.g0087.t1
Lsat_s028.g0088.t1
Lsat_s028.g0089.t1TYROSINE-PROTEIN KINASE RECEPTOR
Lsat_s028.g0090.t1
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