About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s028.g0141.t1
Lsat_s028.g0142.t1FAM11A, B PROTEIN
Lsat_s028.g0143.t1ANK_REP_REGION DOMAIN-CONTAINING PROTEIN
Lsat_s028.g0144.t1STROMAL INTERACTION MOLECULE HOMOLOG
Lsat_s028.g0145.t1STEROID RECEPTOR RNA ACTIVATOR 1
Lsat_s028.g0146.t1
Lsat_s028.g0147.t1
Lsat_s028.g0148.t1
Lsat_s028.g0149.t1RHO GTPASE ACTIVATING PROTEIN AT 15B, ISOFORM C
Lsat_s028.g0150.t1PROTEIN SGT1 HOMOLOG
Lsat_s028.g0151.t1CYTOKINE RECEPTOR
Lsat_s028.g0152.t1CARBON CATABOLITE REPRESSOR PROTEIN 4
Lsat_s028.g0153.t1ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN
Lsat_s028.g0154.t1CHITINASE
Lsat_s028.g0155.t1FORKHEAD BOX PROTEIN H1
Lsat_s028.g0156.t1ZGC:174356
Lsat_s028.g0157.t1
Lsat_s028.g0158.t1ZGC:174356
Lsat_s028.g0159.t1
Lsat_s028.g0160.t1AF4/FMR2 FAMILY MEMBER
Lsat_s028.g0161.t1
Lsat_s028.g0162.t1
Lsat_s028.g0163.t1SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER
Lsat_s028.g0164.t1
Lsat_s028.g0165.t1
Lsat_s028.g0166.t1COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
Lsat_s028.g0167.t1-
Lsat_s028.g0168.t1
Lsat_s028.g0169.t1PROTEASOME MATURATION PROTEIN UMP1
Lsat_s028.g0170.t1RAD50
Lsat_s028.g0171.t1
Lsat_s028.g0172.t1RAD50
Lsat_s028.g0173.t1EXPRESSED PROTEIN
Lsat_s028.g0174.t1
Lsat_s028.g0175.t1
Lsat_s028.g0176.t1RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Lsat_s028.g0177.t1
Lsat_s028.g0178.t1
Lsat_s028.g0179.t1
Lsat_s028.g0180.t1RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Lsat_s028.g0181.t1FI01459P
Lsat_s028.g0182.t1ZINC FINGER MATRIN-TYPE PROTEIN 2
Lsat_s028.g0183.t1COILED-COIL DOMAIN-CONTAINING PROTEIN 158
Lsat_s028.g0184.t1COLLAGEN
Lsat_s028.g0185.t1DNA2/NAM7 HELICASE FAMILY MEMBER
Lsat_s028.g0186.t12-OXO-4-HYDROXY-4-CARBOXY-5-UREIDOIMIDAZOLINE DECARBOXYLASE-RELATED
Lsat_s028.g0187.t1HOMEOBOX PROTEIN CDX
Lsat_s028.g0188.t1
Lsat_s028.g0189.t1
Lsat_s028.g0190.t1
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