About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s029.g0190.t1
Lsat_s029.g0191.t1GLUTAMINE SYNTHETASE
Lsat_s029.g0192.t1CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR
Lsat_s029.g0193.t1
Lsat_s029.g0194.t1SPORE GERMINATION PROTEIN
Lsat_s029.g0195.t1GLUTAMINE SYNTHETASE
Lsat_s029.g0196.t1CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR
Lsat_s029.g0197.t1
Lsat_s029.g0198.t1
Lsat_s029.g0199.t1CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR
Lsat_s029.g0200.t1TYROSINE-PROTEIN KINASE RECEPTOR
Lsat_s029.g0201.t1ADP-RIBOSYLGLYCOHYDROLASE
Lsat_s029.g0202.t1POLYCYSTIN FAMILY MEMBER
Lsat_s029.g0203.t1
Lsat_s029.g0204.t1
Lsat_s029.g0205.t1FIBROBLAST GROWTH FACTOR RECEPTOR
Lsat_s029.g0206.t1THO COMPLEX SUBUNIT 3 THO3
Lsat_s029.g0207.t1
Lsat_s029.g0208.t1THO COMPLEX SUBUNIT 3 THO3
Lsat_s029.g0209.t1-
Lsat_s029.g0210.t1-
Lsat_s029.g0211.t1
Lsat_s029.g0212.t1
Lsat_s029.g0213.t1
Lsat_s029.g0214.t1
Lsat_s029.g0215.t1
Lsat_s029.g0216.t1CHARGED MULTIVESICULAR BODY PROTEIN
Lsat_s029.g0217.t1CHARGED MULTIVESICULAR BODY PROTEIN
Lsat_s030.g0001.t1CYTOSOLIC CARBOXYPEPTIDASE
Lsat_s030.g0002.t1SHORT-CHAIN DEHYDROGENASE/REDUCTASE
Lsat_s030.g0003.t1
Lsat_s030.g0004.t1
Lsat_s030.g0005.t1
Lsat_s030.g0006.t1RIBOSOMAL PROTEIN S9
Lsat_s030.g0007.t1MYOTROPHIN
Lsat_s030.g0008.t1PROTEIN FAM207A
Lsat_s030.g0009.t1MYELIN-ASSOCIATED OLIGODENDROCYTIC BASIC PROTEIN MOBP -RELATED
Lsat_s030.g0010.t1SYNTAXIN
Lsat_s030.g0011.t1ZINC FINGER PROTEIN 200
Lsat_s030.g0012.t1
Lsat_s030.g0013.t1OLIGOPEPTIDE TRANSPORTER-RELATED
Lsat_s030.g0014.t1
Lsat_s030.g0015.t1
Lsat_s030.g0016.t1PLAT DOMAIN-CONTAINING PROTEIN
Lsat_s030.g0017.t1DULLARD PROTEIN PHOSPHATASE
Lsat_s030.g0018.t1BECLIN 1
Lsat_s030.g0019.t1HYCCIN RELATED
Lsat_s030.g0020.t139S RIBOSOMAL PROTEIN L10, MITOCHONDRIAL
Lsat_s030.g0021.t1
Lsat_s030.g0022.t1ANION EXCHANGE PROTEIN
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