About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s030.g0023.t1ELONGATION FACTOR TS
Lsat_s030.g0024.t1MAJOR FACILITATOR SUPERFAMILY PROTEIN-RELATED
Lsat_s030.g0025.t1AGAP008228-PA
Lsat_s030.g0026.t1OTU DOMAIN CONTAINING PROTEIN
Lsat_s030.g0027.t1SORTING AND ASSEMBLY MACHINERY SAMM50 PROTEIN FAMILY MEMBER
Lsat_s030.g0028.t1ATILLA, ISOFORM B-RELATED-RELATED
Lsat_s030.g0029.t1
Lsat_s030.g0030.t1NATRIURETIC PEPTIDE RECEPTOR 3-RELATED
Lsat_s030.g0031.t1
Lsat_s030.g0032.t1GUANYLYL CYCLASE
Lsat_s030.g0033.t1N-ACETYLTRANSFERASE 10
Lsat_s030.g0034.t1PAIRED IMMUNOGLOBULIN-LIKE TYPE 2 RECEPTOR
Lsat_s030.g0035.t1PAIRED IMMUNOGLOBULIN-LIKE TYPE 2 RECEPTOR
Lsat_s030.g0036.t1
Lsat_s030.g0037.t1SPORE COAT PROTEIN SP85
Lsat_s030.g0038.t1SPORE COAT PROTEIN SP85
Lsat_s030.g0039.t1PAIRED IMMUNOGLOBULIN-LIKE TYPE 2 RECEPTOR
Lsat_s030.g0040.t1
Lsat_s030.g0041.t1
Lsat_s030.g0042.t1N-ACETYLTRANSFERASE 10
Lsat_s030.g0043.t1
Lsat_s030.g0044.t1SHORT-CHAIN DEHYDROGENASE/REDUCTASE
Lsat_s030.g0045.t1GLUTAMATE 5-KINASE
Lsat_s030.g0046.t1
Lsat_s030.g0047.t1MAP-KINASE ACTIVATING DEATH DOMAIN PROTEIN MADD /DENN/AEX-3 C.ELEGANS
Lsat_s030.g0048.t1
Lsat_s030.g0049.t1DUAL SPECIFICITY PROTEIN KINASE
Lsat_s030.g0050.t1
Lsat_s030.g0051.t1
Lsat_s030.g0052.t1
Lsat_s030.g0053.t1SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Lsat_s030.g0054.t1
Lsat_s030.g0055.t1E3 UBIQUITIN-PROTEIN LIGASE SIAH2
Lsat_s030.g0056.t1PROTEIN C11ORF74
Lsat_s030.g0057.t1MULTICOPPER OXIDASE-RELATED
Lsat_s030.g0058.t1
Lsat_s030.g0059.t1
Lsat_s030.g0060.t1
Lsat_s030.g0061.t1
Lsat_s030.g0062.t1
Lsat_s030.g0063.t1PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Lsat_s030.g0064.t1-
Lsat_s030.g0065.t1UNCHARACTERIZED
Lsat_s030.g0066.t1
Lsat_s030.g0067.t1
Lsat_s030.g0068.t1
Lsat_s030.g0069.t1
Lsat_s030.g0070.t1CCR4-NOT TRANSCRIPTION COMPLEX RELATED
Lsat_s030.g0071.t1CALCINEURIN-BINDING PROTEIN CABIN 1-RELATED
Lsat_s030.g0072.t1HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
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