Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
Title | Journal | Pubmed ID |
---|---|---|
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
Gene ID | Description |
---|---|
Lsat_s029.g0140.t1 | DIHYDROPTERIDINE REDUCTASE |
Lsat_s029.g0141.t1 | BETA-AMYLOID BINDING PROTEIN-RELATED |
Lsat_s029.g0142.t1 | SYNTAXIN-18 |
Lsat_s029.g0143.t1 | |
Lsat_s029.g0144.t1 | FUCOSE MUTAROTASE |
Lsat_s029.g0145.t1 | |
Lsat_s029.g0146.t1 | |
Lsat_s029.g0147.t1 | ACYL-COA DEHYDROGENASE |
Lsat_s029.g0148.t1 | 60S RIBOSOMAL PROTEIN L26 FAMILY MEMBER |
Lsat_s029.g0149.t1 | SORTILIN RELATED |
Lsat_s029.g0150.t1 | TRANSMEMBRANE PROTEIN |
Lsat_s029.g0151.t1 | GLUTAMATE SEMIALDEHYDE DEHYDROGENASE |
Lsat_s029.g0152.t1 | DNA POLYMERASE TYPE-X FAMILY MEMBER |
Lsat_s029.g0153.t1 | FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED |
Lsat_s029.g0154.t1 | |
Lsat_s029.g0155.t1 | |
Lsat_s029.g0156.t1 | DNA POLYMERASE TYPE-X FAMILY MEMBER |
Lsat_s029.g0157.t1 | |
Lsat_s029.g0158.t1 | BC025462 PROTEIN |
Lsat_s029.g0159.t1 | MOLTING PROTEIN MLT-4 |
Lsat_s029.g0160.t1 | RIBONUCLEASE P PROTEIN SUBUNIT P38 |
Lsat_s029.g0161.t1 | 5'-NUCLEOTIDASE DOMAIN-CONTAINING |
Lsat_s029.g0162.t1 | MYOSIN REGULATORY LIGHT CHAIN 2 |
Lsat_s029.g0163.t1 | |
Lsat_s029.g0164.t1 | G-PROTEIN COUPLED RECEPTOR 124-LIKE PROTEIN |
Lsat_s029.g0165.t1 | |
Lsat_s029.g0166.t1 | |
Lsat_s029.g0167.t1 | HOMEOBOX PROTEIN HHEX |
Lsat_s029.g0168.t1 | |
Lsat_s029.g0169.t1 | GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE |
Lsat_s029.g0170.t1 | GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE |
Lsat_s029.g0171.t1 | PROTEIN CBG26694 |
Lsat_s029.g0172.t1 | PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED |
Lsat_s029.g0173.t1 | |
Lsat_s029.g0174.t1 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
Lsat_s029.g0175.t1 | RE48077P |
Lsat_s029.g0176.t1 | |
Lsat_s029.g0177.t1 | |
Lsat_s029.g0178.t1 | |
Lsat_s029.g0179.t1 | WSCD FAMILY MEMBER CG9164 |
Lsat_s029.g0180.t1 | WSCD FAMILY MEMBER CG9164 |
Lsat_s029.g0181.t1 | |
Lsat_s029.g0182.t1 | PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED |
Lsat_s029.g0183.t1 | WSCD FAMILY MEMBER CG9164 |
Lsat_s029.g0184.t1 | |
Lsat_s029.g0185.t1 | PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED |
Lsat_s029.g0186.t1 | |
Lsat_s029.g0187.t1 | |
Lsat_s029.g0188.t1 | |
Lsat_s029.g0189.t1 | GLUTAMINE SYNTHETASE |