About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s031.g0290.t1ZINC FINGER AND BTB DOMAIN-CONTAINING
Lsat_s031.g0291.t1
Lsat_s031.g0292.t1
Lsat_s031.g0293.t1ZINC FINGER PROTEIN
Lsat_s031.g0294.t1
Lsat_s031.g0295.t1KRAB AND ZINC FINGER DOMAIN-CONTAINING
Lsat_s031.g0296.t1TRANSCRIPTIONAL REPRESSOR PROTEIN YY
Lsat_s031.g0297.t1
Lsat_s031.g0298.t1ZINC FINGER PROTEIN
Lsat_s031.g0299.t1
Lsat_s031.g0300.t1KRAB AND ZINC FINGER DOMAIN-CONTAINING
Lsat_s031.g0301.t1TRANSCRIPTION FACTOR GATA FAMILY MEMBER
Lsat_s031.g0302.t1
Lsat_s031.g0303.t1
Lsat_s031.g0304.t1SERUM RESPONSE FACTOR-BINDING
Lsat_s031.g0305.t1ZGC:101858
Lsat_s031.g0306.t1ZGC:101858
Lsat_s031.g0307.t1ZGC:101858
Lsat_s031.g0308.t1ZGC:101858
Lsat_s031.g0309.t1
Lsat_s031.g0310.t1NUCLEAR HORMONE RECEPTOR
Lsat_s031.g0311.t1
Lsat_s031.g0312.t1ANKYRIN REPEAT CONTAINING
Lsat_s031.g0313.t140S RIBOSOMAL PROTEIN S6
Lsat_s031.g0314.t1TUMOR SUPPRESSOR P53-BINDING PROTEIN 1
Lsat_s031.g0315.t1GRIP AND COILED-COIL DOMAIN-CONTAINING PROTEIN PFC0235W
Lsat_s031.g0316.t1POLY A POLYMERASE CID PAP -RELATED
Lsat_s031.g0317.t1DNA2/NAM7 HELICASE FAMILY
Lsat_s031.g0318.t1
Lsat_s032.g0001.t1GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE
Lsat_s032.g0002.t1
Lsat_s032.g0003.t1
Lsat_s032.g0004.t1
Lsat_s032.g0005.t1
Lsat_s032.g0006.t1
Lsat_s032.g0007.t1
Lsat_s032.g0008.t1
Lsat_s032.g0009.t1RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN
Lsat_s032.g0010.t1INTEGRASE CORE DOMAIN CONTAINING PROTEIN
Lsat_s032.g0011.t1DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN
Lsat_s032.g0012.t1
Lsat_s032.g0013.t1LP04239P
Lsat_s032.g0014.t1
Lsat_s032.g0015.t1
Lsat_s032.g0016.t1
Lsat_s032.g0017.t1
Lsat_s032.g0018.t1FORKHEAD BOX PROTEIN
Lsat_s032.g0019.t1
Lsat_s032.g0020.t1SPRY DOMAIN CONTAINING SOCS BOX PROTEIN
Lsat_s032.g0021.t1SPRY DOMAIN CONTAINING SOCS BOX PROTEIN
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