About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s032.g0222.t1CARBOHYDRATE SULFOTRANSFERASE
Lsat_s032.g0223.t1CARBOHYDRATE SULFOTRANSFERASE
Lsat_s032.g0224.t1
Lsat_s032.g0225.t1CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
Lsat_s032.g0226.t1MOLYBDOPTERIN SYNTHASE RELATED
Lsat_s032.g0227.t1RNA POLYMERASE III DNA DIRECTED -RELATED
Lsat_s032.g0228.t1NUDIX HYDROLASE, NUDC SUBFAMILY
Lsat_s032.g0229.t1SH3 DOMAIN-CONTAINING
Lsat_s032.g0230.t1CHROMATIN ASSEMBLY FACTOR 1 SUBUNIT A CAF-1 SUBUNIT A
Lsat_s032.g0231.t1MORTALITY FACTOR 4-LIKE PROTEIN
Lsat_s032.g0232.t1LITHOSTATHINE
Lsat_s032.g0233.t1
Lsat_s032.g0234.t1
Lsat_s032.g0235.t1I[[H]] CHANNEL, ISOFORM E
Lsat_s032.g0236.t1
Lsat_s032.g0237.t1
Lsat_s032.g0238.t1
Lsat_s032.g0239.t1UNCHARACTERIZED
Lsat_s032.g0240.t1CASEIN KINASE-RELATED
Lsat_s032.g0241.t1
Lsat_s032.g0242.t1PCNA-ASSOCIATED FACTOR
Lsat_s032.g0243.t1THYROID RECEPTOR INTERACTING PROTEIN RELATED
Lsat_s032.g0244.t1
Lsat_s032.g0245.t1
Lsat_s032.g0246.t1BRAKELESS PROTEIN
Lsat_s032.g0247.t1
Lsat_s032.g0248.t1
Lsat_s032.g0249.t1
Lsat_s032.g0250.t1
Lsat_s032.g0251.t1
Lsat_s032.g0252.t1
Lsat_s032.g0253.t1WNT RELATED
Lsat_s032.g0254.t1
Lsat_s032.g0255.t1USE1-LIKE PROTEIN
Lsat_s032.g0256.t1TESTIS-EXPRESSED PROTEIN 45
Lsat_s032.g0257.t1
Lsat_s032.g0258.t1
Lsat_s032.g0259.t1
Lsat_s032.g0260.t1
Lsat_s032.g0261.t1DNA REPAIR POLYMERASE UMUC / TRANSFERASE FAMILY MEMBER
Lsat_s032.g0262.t1GALACTOSE-1-PHOSPHATE URIDYLYLTRANSFERASE
Lsat_s032.g0263.t1UBIQUITIN-CONJUGATING ENZYME E2
Lsat_s032.g0264.t1RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Lsat_s032.g0265.t1SKI ONCOGENE-RELATED
Lsat_s032.g0266.t1
Lsat_s032.g0267.t1
Lsat_s032.g0268.t1
Lsat_s032.g0269.t1FMRFAMIDE RECEPTOR-RELATED
Lsat_s032.g0270.t1
Lsat_s032.g0271.t1
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