Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
| Gene ID | Description |
|---|---|
| Lsat_s033.g0050.t1 | |
| Lsat_s033.g0051.t1 | HOMEOBOX PROTEIN UNC-4 HOMOLOG |
| Lsat_s033.g0052.t1 | |
| Lsat_s033.g0053.t1 | HOMEOBOX PROTEIN UNC-4 HOMOLOG |
| Lsat_s033.g0054.t1 | |
| Lsat_s033.g0055.t1 | |
| Lsat_s033.g0056.t1 | |
| Lsat_s033.g0057.t1 | HOMEOBOX PROTEIN UNC-4 HOMOLOG |
| Lsat_s033.g0058.t1 | HOMEOBOX PROTEIN UNC-4 HOMOLOG |
| Lsat_s033.g0059.t1 | CADHERIN DOMAIN-CONTAINING PROTEIN |
| Lsat_s033.g0060.t1 | |
| Lsat_s033.g0061.t1 | |
| Lsat_s033.g0062.t1 | |
| Lsat_s033.g0063.t1 | |
| Lsat_s033.g0064.t1 | RAB GTPASE-ACTIVATING PROTEIN 1-LIKE |
| Lsat_s033.g0065.t1 | |
| Lsat_s033.g0066.t1 | |
| Lsat_s033.g0067.t1 | SIGNAL PEPTIDE, CUB AND EGF-LIKE DOMAIN-CONTAINING |
| Lsat_s033.g0068.t1 | |
| Lsat_s033.g0069.t1 | SIGNAL PEPTIDE, CUB AND EGF-LIKE DOMAIN-CONTAINING |
| Lsat_s033.g0070.t1 | |
| Lsat_s033.g0071.t1 | |
| Lsat_s033.g0072.t1 | |
| Lsat_s033.g0073.t1 | SIGNAL PEPTIDE, CUB AND EGF-LIKE DOMAIN-CONTAINING |
| Lsat_s033.g0074.t1 | SIGNAL PEPTIDE, CUB AND EGF-LIKE DOMAIN-CONTAINING |
| Lsat_s033.g0075.t1 | ATILLA, ISOFORM B-RELATED-RELATED |
| Lsat_s033.g0076.t1 | CALCIUM-SIGNAL MODULATING CYCLOPHILIN LIGAND CAML |
| Lsat_s033.g0077.t1 | SOLUTE CARRIER FAMILY 25 |
| Lsat_s033.g0078.t1 | FOLLICULIN FAMILY MEMBER |
| Lsat_s033.g0079.t1 | PROTOHEME IX FARNESYLTRANSFERASE, MITOCHONDRIAL |
| Lsat_s033.g0080.t1 | AMINOTRANSFERASE |
| Lsat_s033.g0081.t1 | |
| Lsat_s033.g0082.t1 | |
| Lsat_s033.g0083.t1 | |
| Lsat_s033.g0084.t1 | AMINOTRANSFERASE |
| Lsat_s033.g0085.t1 | HOMEO BOX HB9 LIKE A-RELATED |
| Lsat_s033.g0086.t1 | CELL FATE DETERMINING PROTEIN MAB21-RELATED |
| Lsat_s033.g0087.t1 | PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT Q-RELATED |
| Lsat_s033.g0088.t1 | BETA-TUBULIN COFACTOR D |
| Lsat_s033.g0089.t1 | |
| Lsat_s033.g0090.t1 | |
| Lsat_s033.g0091.t1 | |
| Lsat_s033.g0092.t1 | DENTIN MATRIX PROTEIN 4 PROTEIN FAM20 |
| Lsat_s033.g0093.t1 | PROLINE-RICH EXTENSIN-LIKE |
| Lsat_s033.g0094.t1 | |
| Lsat_s033.g0095.t1 | |
| Lsat_s033.g0096.t1 | |
| Lsat_s033.g0097.t1 | DENTIN MATRIX PROTEIN 4 PROTEIN FAM20 |
| Lsat_s033.g0098.t1 | |
| Lsat_s033.g0099.t1 | THUMP DOMAIN CONTAINING PROTEIN 1-RELATED |
