Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
| Gene ID | Description |
|---|---|
| Lsat_s033.g0150.t1 | |
| Lsat_s033.g0151.t1 | PHD FINGER TRANSCRIPTION FACTOR |
| Lsat_s033.g0152.t1 | |
| Lsat_s033.g0153.t1 | |
| Lsat_s033.g0154.t1 | |
| Lsat_s033.g0155.t1 | SPERM MITOCHONDRIAL-ASSOCIATED CYSTEINE-RICH PROTEIN |
| Lsat_s033.g0156.t1 | |
| Lsat_s033.g0157.t1 | RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED |
| Lsat_s033.g0158.t1 | |
| Lsat_s033.g0159.t1 | SI:DKEY-192D15.2-RELATED |
| Lsat_s033.g0160.t1 | |
| Lsat_s033.g0161.t1 | |
| Lsat_s033.g0162.t1 | |
| Lsat_s033.g0163.t1 | ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 7 |
| Lsat_s033.g0164.t1 | |
| Lsat_s033.g0165.t1 | GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE, ISOMERIZING |
| Lsat_s033.g0166.t1 | LEUCINE ZIPPER PROTEIN 4-RELATED |
| Lsat_s033.g0167.t1 | |
| Lsat_s033.g0168.t1 | PROTEASE M1 ZINC METALLOPROTEASE |
| Lsat_s033.g0169.t1 | |
| Lsat_s033.g0170.t1 | FRIZZLED |
| Lsat_s033.g0171.t1 | |
| Lsat_s033.g0172.t1 | |
| Lsat_s033.g0173.t1 | |
| Lsat_s033.g0174.t1 | |
| Lsat_s033.g0175.t1 | |
| Lsat_s033.g0176.t1 | ANKYRIN REPEAT AND STERILE ALPHA MOTIF DOMAIN-CONTAINING PROTEIN 1 |
| Lsat_s033.g0177.t1 | |
| Lsat_s033.g0178.t1 | ANKYRIN REPEAT AND STERILE ALPHA MOTIF DOMAIN-CONTAINING PROTEIN 1 |
| Lsat_s033.g0179.t1 | |
| Lsat_s033.g0180.t1 | |
| Lsat_s033.g0181.t1 | UNCHARACTERIZED |
| Lsat_s033.g0182.t1 | NHL REPEAT-CONTAINING PROTEIN-RELATED |
| Lsat_s033.g0183.t1 | - |
| Lsat_s033.g0184.t1 | LUPUS LA PROTEIN-RELATED |
| Lsat_s033.g0185.t1 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED |
| Lsat_s033.g0186.t1 | CYTOSKELETON-ASSOCIATED PROTEIN 4 |
| Lsat_s033.g0187.t1 | |
| Lsat_s033.g0188.t1 | GUANINE NUCLEOTIDE EXCHANGE FACTOR |
| Lsat_s033.g0189.t1 | BANK1/PIK3AP1 FAMILY MEMBER |
| Lsat_s033.g0190.t1 | |
| Lsat_s033.g0191.t1 | |
| Lsat_s033.g0192.t1 | 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2 |
| Lsat_s033.g0193.t1 | UNCHARACTERIZED |
| Lsat_s033.g0194.t1 | CARDIOLIPIN HYDROLASE |
| Lsat_s033.g0195.t1 | SERINE/THREONINE-PROTEIN KINASE 19 |
| Lsat_s033.g0196.t1 | DOM-3 RELATED |
| Lsat_s033.g0197.t1 | BAT4 PROTEIN-RELATED |
| Lsat_s033.g0198.t1 | TESTIS-EXPRESSED PROTEIN 47 |
| Lsat_s033.g0199.t1 | TESTIS-EXPRESSED PROTEIN 47 |
