About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s033.g0250.t1METABOTROPIC GLUTAMATE RECEPTOR
Lsat_s033.g0251.t1INACTIVE RHOMBOID PROTEIN
Lsat_s033.g0252.t1INACTIVE RHOMBOID PROTEIN
Lsat_s033.g0253.t1BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST
Lsat_s033.g0254.t1INACTIVE RHOMBOID PROTEIN
Lsat_s033.g0255.t1DNA-3-METHYLADENINE GLYCOSYLASE
Lsat_s033.g0256.t1CGTHBA PROTEIN -14 GENE PROTEIN
Lsat_s033.g0257.t1
Lsat_s033.g0258.t1RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN
Lsat_s033.g0259.t1SPARC OSTEONECTIN
Lsat_s033.g0260.t1
Lsat_s033.g0261.t1
Lsat_s033.g0262.t1CENTROCORTIN FAMILY MEMBER
Lsat_s033.g0263.t1
Lsat_s033.g0264.t1TRANSMEMBRANE 9 SUPERFAMILY PROTEIN
Lsat_s033.g0265.t1COMPLEMENT COMPONENT 1, S SUBCOMPONENT-RELATED
Lsat_s033.g0266.t1HELICASE
Lsat_s033.g0267.t1MYOSIN LIGHT CHAIN 1, 3
Lsat_s033.g0268.t1
Lsat_s033.g0269.t1
Lsat_s033.g0270.t1CALCIUM BINDING PROTEIN
Lsat_s033.g0271.t1UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
Lsat_s033.g0272.t1UPF0472 PROTEIN C16ORF72
Lsat_s033.g0273.t1-
Lsat_s033.g0274.t1
Lsat_s033.g0275.t1ALPHA-L-FUCOSIDASE
Lsat_s033.g0276.t1
Lsat_s033.g0277.t1
Lsat_s033.g0278.t1
Lsat_s033.g0279.t1FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED
Lsat_s033.g0280.t1
Lsat_s033.g0281.t1
Lsat_s033.g0282.t1
Lsat_s033.g0283.t1TRANSMEMBRANE CHANNEL-RELATED
Lsat_s033.g0284.t1
Lsat_s033.g0285.t1TRANSMEMBRANE CHANNEL-RELATED
Lsat_s033.g0286.t1KRUEPPEL-LIKE TRANSCRIPTION FACTOR
Lsat_s033.g0287.t1FTP DOMAIN-CONTAINING PROTEIN
Lsat_s033.g0288.t1ARFAPTIN-RELATED
Lsat_s033.g0289.t1
Lsat_s033.g0290.t1
Lsat_s033.g0291.t1
Lsat_s033.g0292.t1IONOTROPIC RECEPTOR 20A-RELATED
Lsat_s033.g0293.t1-
Lsat_s033.g0294.t1-
Lsat_s033.g0295.t1
Lsat_s033.g0296.t1
Lsat_s033.g0297.t1SPRY DOMAIN CONTAINING SOCS BOX PROTEIN
Lsat_s033.g0298.t1ELONGATOR COMPLEX PROTEIN 6
Lsat_s033.g0299.t1FATTY ACID SYNTHASE
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