About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s034.g0272.t1
Lsat_s034.g0273.t1
Lsat_s034.g0274.t1PUTATIVE TREBLE-CLEF ZINC-FINGER C2ORF42 FAMILY MEMBER
Lsat_s034.g0275.t1
Lsat_s034.g0276.t1KINESIN-LIKE PROTEIN KIF11
Lsat_s034.g0277.t1
Lsat_s035.g0001.t1
Lsat_s035.g0002.t1SI:CH211-59O9.10
Lsat_s035.g0003.t1
Lsat_s035.g0004.t1SI:CH211-59O9.10
Lsat_s035.g0005.t1
Lsat_s035.g0006.t1E3 UBIQUITIN-PROTEIN LIGASE ATL42
Lsat_s035.g0007.t1AUGMIN SUBUNIT 4 FAMILY MEMBER
Lsat_s035.g0008.t1E3 UBIQUITIN-PROTEIN LIGASE ATL42
Lsat_s035.g0009.t1AUGMIN SUBUNIT 4 FAMILY MEMBER
Lsat_s035.g0010.t1UBIQUITIN-ACTIVATING ENZYME E1
Lsat_s035.g0011.t1HISTIDINE-RICH GLYCOPROTEIN
Lsat_s035.g0012.t1D-AMINO ACID OXIDASE
Lsat_s035.g0013.t1D-AMINO ACID OXIDASE
Lsat_s035.g0014.t1
Lsat_s035.g0015.t1
Lsat_s035.g0016.t1ATP-DEPENDENT RNA HELICASE
Lsat_s035.g0017.t1
Lsat_s035.g0018.t1ATP-DEPENDENT RNA HELICASE
Lsat_s035.g0019.t1ZINC FINGER PROTEIN
Lsat_s035.g0020.t1
Lsat_s035.g0021.t1FAS-ASSOCIATED PROTEIN
Lsat_s035.g0022.t1NUDIX HYDROLASE
Lsat_s035.g0023.t1UNCHARACTERIZED
Lsat_s035.g0024.t1GLUTATHIONE S-TRANSFERASE KAPPA
Lsat_s035.g0025.t1
Lsat_s035.g0026.t1LD27203P-RELATED
Lsat_s035.g0027.t1ZINC FINGER PROTEIN
Lsat_s035.g0028.t1
Lsat_s035.g0029.t1
Lsat_s035.g0030.t1
Lsat_s035.g0031.t1
Lsat_s035.g0032.t1
Lsat_s035.g0033.t1
Lsat_s035.g0034.t1
Lsat_s035.g0035.t1BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, HES-RELATED
Lsat_s035.g0036.t1ROLLING PEBBLES, ISOFORM B
Lsat_s035.g0037.t1
Lsat_s035.g0038.t1CYTIDINE DEAMINASE
Lsat_s035.g0039.t1METALLOPHOSPHOESTERASE
Lsat_s035.g0040.t1METALLOPHOSPHOESTERASE
Lsat_s035.g0041.t1METALLOPROTEASE TLDD
Lsat_s035.g0042.t1METALLOPHOSPHOESTERASE
Lsat_s035.g0043.t1INNER MEMBRANE TRANSPORT PROTEIN YAJR
Lsat_s035.g0044.t1EPH RECEPTOR A5
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