About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s035.g0045.t1
Lsat_s035.g0046.t1ZINC FINGER MATRIN-TYPE PROTEIN 3
Lsat_s035.g0047.t1PHOSPHATIDYLINOSITOL KINASE
Lsat_s035.g0048.t1REPETIN
Lsat_s035.g0049.t1PHOSPHATIDYLINOSITOL KINASE
Lsat_s035.g0050.t1MIGRATION AND INVASION-INHIBITORY PROTEIN
Lsat_s035.g0051.t1XYLOSIDE XYLOSYLTRANSFERASE 1
Lsat_s035.g0052.t1KRAB AND ZINC FINGER DOMAIN-CONTAINING
Lsat_s035.g0053.t1WNT RELATED
Lsat_s035.g0054.t1
Lsat_s035.g0055.t1
Lsat_s035.g0056.t1
Lsat_s035.g0057.t1
Lsat_s035.g0058.t1GLYCINE-, GLUTAMATE-, THIENYLCYCLOHEXYLPIPERIDINE-BINDING PROTEIN
Lsat_s035.g0059.t1CASPASE-ACTIVATED DNASE
Lsat_s035.g0060.t1ALPHA-(1,3)-FUCOSYLTRANSFERASE C-RELATED
Lsat_s035.g0061.t1MITOCHONDRIAL 39S RIBOSOMAL PROTEIN L51
Lsat_s035.g0062.t1
Lsat_s035.g0063.t1BETA-LACTAMASE-RELATED
Lsat_s035.g0064.t1POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATED
Lsat_s035.g0065.t1CONTACTIN 5
Lsat_s035.g0066.t1
Lsat_s035.g0067.t1
Lsat_s035.g0068.t1
Lsat_s035.g0069.t1
Lsat_s035.g0070.t1BOLA-LIKE PROTEIN 3
Lsat_s035.g0071.t1
Lsat_s035.g0072.t1
Lsat_s035.g0073.t1
Lsat_s035.g0074.t1
Lsat_s035.g0075.t1
Lsat_s035.g0076.t1
Lsat_s035.g0077.t1
Lsat_s035.g0078.t1PROTEIN CBG12054-RELATED
Lsat_s035.g0079.t1
Lsat_s035.g0080.t1FMRFAMIDE RECEPTOR-RELATED
Lsat_s035.g0081.t1
Lsat_s035.g0082.t1
Lsat_s035.g0083.t1PR DOMAIN ZINC FINGER PROTEIN
Lsat_s035.g0084.t1PRE-MRNA CLEAVAGE FACTOR IM, 25KD SUBUNIT
Lsat_s035.g0085.t1
Lsat_s035.g0086.t1ZINC FINGER PROTEIN
Lsat_s035.g0087.t1CYSTEINE PROTEASE FAMILY C1-RELATED
Lsat_s035.g0088.t1CYSTEINE PROTEASE FAMILY C1-RELATED
Lsat_s035.g0089.t1CYSTEINE PROTEASE FAMILY C1-RELATED
Lsat_s035.g0090.t1
Lsat_s035.g0091.t1G-PROTEIN COUPLED RECEPTOR 158-RELATED
Lsat_s035.g0092.t1
Lsat_s035.g0093.t1
Lsat_s035.g0094.t1
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