About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s035.g0095.t1
Lsat_s035.g0096.t1
Lsat_s035.g0097.t1G-PROTEIN COUPLED RECEPTOR 158-RELATED
Lsat_s035.g0098.t1
Lsat_s035.g0099.t1
Lsat_s035.g0100.t1
Lsat_s035.g0101.t1ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 27
Lsat_s035.g0102.t1
Lsat_s035.g0103.t1ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 27
Lsat_s035.g0104.t1SPERMATOGENESIS-ASSOCIATED PROTEIN 2/TAMOZHENNIC
Lsat_s035.g0105.t1NUDIX HYDROLASE
Lsat_s035.g0106.t1DYNEIN REGULATORY COMPLEX SUBUNIT 4
Lsat_s035.g0107.t1
Lsat_s035.g0108.t14.1 G PROTEIN
Lsat_s035.g0109.t1
Lsat_s035.g0110.t1
Lsat_s035.g0111.t1GLYCINE CLEAVAGE SYSTEM H PROTEIN
Lsat_s035.g0112.t1
Lsat_s035.g0113.t1HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Lsat_s035.g0114.t1TRANSMEMBRANE PROTEIN
Lsat_s035.g0115.t1
Lsat_s035.g0116.t1FMRFAMIDE RECEPTOR-RELATED
Lsat_s035.g0117.t1CYTOCHROME P450 FAMILY 3
Lsat_s035.g0118.t1CYTOCHROME P450 FAMILY 3
Lsat_s035.g0119.t1CYTOCHROME P450 FAMILY 3
Lsat_s035.g0120.t1CYTOCHROME P450 FAMILY 3
Lsat_s035.g0121.t1
Lsat_s035.g0122.t1PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
Lsat_s035.g0123.t1PROTEIN NAKED CUTICLE
Lsat_s035.g0124.t1
Lsat_s035.g0125.t1EXOCYST COMPLEX COMPONENT SEC5
Lsat_s035.g0126.t1
Lsat_s035.g0127.t1
Lsat_s035.g0128.t1SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE
Lsat_s035.g0129.t1NFAT
Lsat_s035.g0130.t1
Lsat_s035.g0131.t1CENTROMERE PROTEIN N
Lsat_s035.g0132.t1RIBONUCLEASE P PROTEIN SUBUNIT P40
Lsat_s035.g0133.t1ALANYL-TRNA SYNTHETASE
Lsat_s035.g0134.t1-
Lsat_s035.g0135.t1PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT
Lsat_s035.g0136.t1PROTEIN C6ORF149
Lsat_s035.g0137.t1
Lsat_s035.g0138.t1
Lsat_s035.g0139.t1
Lsat_s035.g0140.t1
Lsat_s035.g0141.t1
Lsat_s035.g0142.t1
Lsat_s035.g0143.t1
Lsat_s035.g0144.t1
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