About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110 Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s036.g0140.t1
Lsat_s036.g0141.t1
Lsat_s036.g0142.t1
Lsat_s036.g0143.t1HEXOKINASE
Lsat_s036.g0144.t1
Lsat_s036.g0145.t1BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST
Lsat_s036.g0146.t1
Lsat_s036.g0147.t1PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Lsat_s036.g0148.t143 KDA RECEPTOR-ASSOCIATED PROTEIN OF THE SYNAPSE
Lsat_s036.g0149.t1CROSSVEINLESS 2
Lsat_s036.g0150.t1SYNAPTOTAGMIN
Lsat_s036.g0151.t1FMRFAMIDE-RELATED PEPTIDES
Lsat_s036.g0152.t1UNCHARACTERIZED
Lsat_s036.g0153.t1UNCHARACTERIZED
Lsat_s036.g0154.t1SYNAPTOTAGMIN
Lsat_s036.g0155.t1
Lsat_s036.g0156.t1
Lsat_s036.g0157.t1
Lsat_s036.g0158.t1
Lsat_s036.g0159.t1NAD DEPENDENT EPIMERASE/DEHYDRATASE
Lsat_s036.g0160.t1TUBULIN--TYROSINE LIGASE-LIKE PROTEIN 12
Lsat_s036.g0161.t160S RIBOSOMAL PROTEIN L36A/L44
Lsat_s036.g0162.t1SMALL ACIDIC PROTEIN-RELATED
Lsat_s036.g0163.t1UNCHARACTERIZED
Lsat_s036.g0164.t1GAMMA TUBULIN COMPLEX PROTEIN
Lsat_s036.g0165.t1TRANSCRIPTIONAL ENHANCER FACTOR TEF RELATED
Lsat_s036.g0166.t1PARVIN
Lsat_s036.g0167.t1UNCHARACTERIZED
Lsat_s036.g0168.t1PROTEASE M3 THIMET OLIGOPEPTIDASE-RELATED
Lsat_s036.g0169.t1
Lsat_s036.g0170.t1
Lsat_s036.g0171.t1
Lsat_s036.g0172.t1
Lsat_s036.g0173.t1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Lsat_s036.g0174.t1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Lsat_s036.g0175.t1
Lsat_s036.g0176.t1SERINE/THREONINE-PROTEIN KINASE
Lsat_s036.g0177.t1
Lsat_s036.g0178.t1BCL-2 RELATED
Lsat_s036.g0179.t1VWFA DOMAIN-CONTAINING PROTEIN
Lsat_s036.g0180.t1
Lsat_s036.g0181.t1
Lsat_s036.g0182.t1ZINC FINGER PROTEIN
Lsat_s036.g0183.t1CYTOKINE RECEPTOR
Lsat_s036.g0184.t1CYTOKINE RECEPTOR
Lsat_s036.g0185.t1
Lsat_s036.g0186.t1G-PROTEIN COUPLED RECEPTOR
Lsat_s036.g0187.t1
Lsat_s036.g0188.t1
Lsat_s036.g0189.t1G-PROTEIN COUPLED RECEPTOR
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